TABLE 2.
Structured population association tests between haplotype frequency at single-marker loci and rym4-encoded BYMV resistance
|
K = 1
|
K = 2
|
||||||
|---|---|---|---|---|---|---|---|
| Marker locus | Distance in cMa | χ2 | d.f. | TSb | P-value | TSb | P-value |
| GBR1834 | 5.5 | 11.40 | 4 | 6.41 | 0.0134* | 7.39 | 0.0427* |
| GBS0526 | 4.5 | 1.89 | 1 | 0.95 | 0.1670 | 1.55 | 0.2288 |
| GBS0419 | 2.2 | 7.39 | 1 | 3.99 | 0.0051** | 2.66 | 0.0812 |
| No1134 | 0.02 | 31.18 | 3 | 16.29 | <0.0001*** | 17.00 | <0.0001*** |
| Hv-eIF4E -1 | 0 | 31.34 | 3 | 16.44 | <0.0001*** | 16.92 | <0.0001*** |
| Hv-eIF4E -2 | 0 | 31.04 | 3 | 16.19 | <0.0001*** | 16.94 | <0.0001*** |
| Hv-eIF4E -3 | 0 | 31.04 | 3 | 16.19 | <0.0001*** | 16.94 | <0.0001*** |
| No519 | 0 | 31.00 | 2 | 16.00 | <0.0001*** | 17.27 | <0.0001*** |
| No969 | 0 | 7.64 | 2 | 4.04 | 0.0209* | 6.97 | 0.0066** |
| GBR1845 | 0.4 | 30.58 | 1 | 15.80 | <0.0001*** | 16.78 | <0.0001*** |
| GBR1851 | 0.7 | 20.93 | 2 | 10.84 | <0.0001*** | 11.79 | <0.0001*** |
| GBR1020 | 1.0 | 16.20 | 1 | 8.35 | <0.0001*** | 9.27 | <0.0001*** |
*P ≤ 0.05, **P ≤ 0.01, ***P ≤ 0.001.
a
Relative to ATG of Hv-eIF4E.
b
Test statistic of STRAT (TS).