Table 1.
Protein | Oxygen
|
Carbon Monoxide
|
|||||||
---|---|---|---|---|---|---|---|---|---|
k′on, μM−1·s−1 | koff, s−1 | Kd (koff/k′on), nM | P50, mmHg | l′on, μM−1·s−1 | loff, s−1 | Ld (loff/l′on), nM | M′ Kd/Ld | Autoxidationt1/2, h | |
HbN wild type | 25 | 0.199 | — | 0.013 | 6.75 | 0.0051 | — | 7.44 | 537 |
HbN Y33L (B10) | — | 45 | — | — | — | — | — | — | — |
HbN Y33F(B10) | — | 30 | — | — | — | — | — | — | — |
C. eugametos wild type* | † | 0.0141 | — | — | † | 0.0022 | — | 5.0 | 169 |
C. eugametos Y63L (B10)* | — | 0.95 | — | — | — | — | — | — | 7.1 |
N. commune GibN‡ | 390 | 79 | 208 | 0.55 | 41 | 0.01 | 0.24 | 867 | 3.5 |
Barley Hb§ | 7.1 | 0.0272 | 3.82 | — | 0.57 | 0.0011 | 1.93 | 2.0 | — |
Ascaris Hb¶ | 1.5 | 0.0041 | 2.7 | 0.0038 | 17 | 0.018 | 1.1 | 2.5 | — |
Soybean leghemoglobin** | 120 | 5.6 | 48 | 0.04 | 13 | 0.0078 | 0.62 | 78 | 3.5 |
Sperm whale Mb‡‡ | 14 | 12 | 857 | 0.51 | 0.51 | 0.019 | 37 | 23 | 13.8 |
Kinetic constants for HbN represent the overall reactions and are not assigned to the binding or dissociation of the first or the second ligand molecule. l, analogous to k, is the rate constant for carbon monoxide. M′ for HbN, Chlamydomonas, and barley hemoglobins is expressed in molar terms, M′ = 1.34 × M, where M is the experimentally determined value expressed in terms of gas pressures. M′ for other proteins is given by the ratio Kd/Ld.
Couture et al. (28), data obtained at pH 9.5.
Combination rates of five-coordinate Chlamydomonas Hb with ligands are rate limited by the conversion of a six-coordinate species to a five-coordinate species prior to ligand binding (see details in ref. 28).
Thorsteinsson et al. (14).
Duff et al. (35), k′on is estimated from M′, koff, and Ld.