Table 2.
SSR ≥ 20 bp | SSR ≥ 30 bp | ||||
Motif | N | Freq | Motif | N | Freq |
AT | 110 | 0.17 | AT | 34 | 0.24 |
AGG | 74 | 0.12 | AAT | 18 | 0.13 |
CCG | 56 | 0.08 | AGG | 12 | 0.08 |
AC | 43 | 0.07 | AC | 11 | 0.08 |
AAAAC | 37 | 0.06 | AGC | 10 | 0.07 |
AGC | 35 | 0.05 | CCG | 8 | 0.06 |
AAT | 28 | 0.04 | AGCCG | 7 | 0.05 |
CCCGG | 26 | 0.04 | AG | 6 | 0.04 |
AAAC | 21 | 0.03 | ACGGC | 5 | 0.03 |
AG | 19 | 0.03 | AAAAC | 4 | 0.03 |
AAAAT | 4 | 0.03 | |||
Total | 449 | 0.70 | Total | 119 | 0.83 |
Frequency is the proportion of all EST-SSRs represented by each motif.