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. 2007 Feb 24;8:57. doi: 10.1186/1471-2164-8-57

Table 1.

Comparative features of the chromosome 1 strand switch region and the 5'-ends of the adjacent XPP and PAXP genes in 15 Leishmania species a.

Species XPP Switch region PAXP
% nt div. b div. aa/32aa c Size (bp) % AT % nt div d % nt div. e div. aa/36aa f

L. aethiopica 1 1 1640 51 15 1 0
L. arabica 1 0 1658 50 16 4 1
L. turanica 2 1 1665 50 22 2 0
L. major 3 0 1666 50 16 5 1
L. tropica 2 0 1659 50 14 2 1
L. archibaldi 1 0 1668 51 16 3 1
L. donovani 1 0 1666 50 14 2 1
L. infantum 1 0 1662 50 15 3 1
L. amazonensis 3 0 1669 52 16 2 0
Sauroleishmania 9 3 1643 54 25 4 0
L. peruviania 3 1 1656 53 23 13 4
L. braziliensis 3 1 1657 53 24 10 3
L. guyanensis 3 1 1652 53 23 11 3
L. sp. MAR1 12 4 1658 51 30 12 0
L. enriettii 6 1 1642 50 25 8 0

a For each species, the divergent nucleotides or amino acids were counted as compared with the consensus sequence; b Percentage of nucleotide (nt) divergence established from the sequence of 97 nt at the 5' end of the gene; all percentages were rounded up to the closest integer number; c Number of unconserved amino acids (aa) out of 32 aa at the N-terminal end of the protein; d Percentage of nucleotide (nt) divergence established from the consensus sequence over the whole SSR as defined in the Material and Methods; e Percentage of nucleotide (nt) divergence established from the sequence of 109 nt at the 5' end of the gene; f Number of unconserved amino acids (aa) out of 36 aa at the N-terminal end of the protein.