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. 2007 Jan 23;35(3):930–938. doi: 10.1093/nar/gkl1145

Table 2.

Deacylase activity in crude extracts

Strain Deacylase activity (U/mg)
K37ΔrecAλDE3 + pET3alpa 0.9
K37ΔrecAΔtyrHλDE3 + pET3alpa <0.1
K37ΔrecAΔtyrHλDE3 + pET3alpa::GEK1 7700
K37ΔrecAλDE3 + pET15blpa 1.0
K37ΔrecAΔtyrHλDE3 + pET15blpa <0.1
K37ΔrecAΔtyrHλDE3 + pET15blpa::GEK1 4000

Cells were grown overnight at 37°C in 2xTY medium with 100 μg/ml ampicillin. Then, IPTG was added at a final concentration of 1 mM, and growth was continued for 5 h at room temperature. Specific deacylase activities were measured in crude extracts obtained by sonication. Final total protein concentration in the extracts was 10–20 mg/ml. Rates of hydrolysis of d-[3H]Tyr-tRNATyr in the presence of 20 mM Tris-HCl (pH 7.8), 100 nM d-[3H]Tyr-tRNATyr, 5 mM MgCl2, 40 μM zinc acetate, 50 μg/ml BSA and 2.5 mM 2-mercaptoethanol were measured as described in Materials and Methods. One unit corresponds to the enzyme activity capable of hydrolyzing 1 pmol of d-[3H]Tyr-tRNATyr per min under the above assay conditions.