Table 4. Nature of polymorphisms and detection sensitivity of SFPs.
| (a) CP and LG | |||
| Parameters | SFPs | ||
| 1NP | Multiple-NP | ||
| (1–5) | (6–20) | ||
| SFP detected by gene-chip | 8(10) | 21(27) | 48(63) |
| SFP escaped by gene-chip | 9(33) | 8(30) | 10(37) |
| Detection sensitivity (%) | 63 | 83 | |
| (b) CP and RT | |||
| Parameters | SFPs | ||
| 1NP | Multiple-NP | ||
| (1–5) | (6–20) | ||
| SFP detected by gene-chip | 21(12) | 87(48) | 72(40) |
| SFP escaped by gene-chip | 18(28) | 18(28) | 29(44) |
| Detection sensitivity (%) | 75 | 71 | |
Values in parentheses indicate percentage of SFP detected/escaped by gene-chip. Table includes SFP data analyzed at estimated 9.5% FDR in CP&LG and 9% FDR in CP&RT dataset.
CP = Cypress, LG = LaGrue, RT = RT0034, NP = nucleotide polymorphism.