Table 1.
Base change | Region in tRNA | Relative Transamidase Activity (%) |
---|---|---|
Wild-type tRNAAsn | 100.0 | |
A9 → G9 | D-stem | 29.8 |
G10·C25 →A10·U25 | 98.7 | |
C11·G24 →U11·A24 | 91.3 | |
G13·C22 →U13·U22 | 70.9 | |
U27·U43 →C27·G43 | Anticodon stem | 55.4 |
U36→A36 | Anticodon loop | 68.9 |
U36→C36 | 98.7 | |
A37→G37 | 66.5 | |
U47→Δ47 | Variable loop | 40.1 |
A49·U65→U49·G65 | T-stem | < 0.5 |
A49·U65→C49·G65 | 62.8 | |
A49·U65→G49·U65 | 49.9 | |
A49·U65→U49·A65 | < 0.5 | |
G56→A56 | T-loop | 38.1 |
C5·G68→U5·A68 | Acceptor stem | 51.1 |
Wild-type tRNAAsp | < 0.5 |
[14C]Asp-tRNA (0.5 μM) was incubated with M. thermautotrophicus GatCAB (10 nM) at 37°C. The enzyme activity with each variant was expressed as relative percentage of conversion rate for wild type Asp-tRNAAsn to Asn-tRNAAsn.