Table 5.
List of primary rat beta-cell genes predicted as NF-κB targets in both rat and a primate species (top 30 genes).
| Ensembl gene ID | Gene description | Prob. | Human | Mouse | Chimpanzee |
| ENSRNOG00000011023 | Nitric oxide synthase, inducible | 0.999999 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000022256 | Small inducible cytokine B10 precursor | 0.999988 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000014297 | Syndecan-4 precursor | 0.999814 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000012180 | RAB5A, member RAS oncogene family | 0.999691 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000020102 | sirtuin | 0.999613 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000002792 | Macrophage inflammatory protein 2 precursor | 0.999578 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000021130 | Sulfonylurea receptor 1 | 0.999543 | NF-κB | NF-κB | CTL |
| ENSRNOG00000021156 | PREDICTED: vascular endothelial growth factor B | 0.999392 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000007390 | NF-κB inhibitor alpha | 0.999265 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000013412 | cAMP response element binding protein | 0.999217 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000002843 | Small inducible cytokine B5 precursor | 0.999081 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000008217 | Mucosal addressing cell adhesion molecule 1 precursor | 0.998906 | NF-κB | NF-κB | NA |
| ENSRNOG00000020481 | Platelet-activating factor acetylhydrolase IB gamma subunit | 0.998769 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000031090 | RT1 class I, CE7 | 0.99778 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000000723 | RT1 class I, CE5 isoform 2 | 0.99716 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000011559 | Calponin-3 | 0.996972 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000000468 | RT1 class I, A3 | 0.996707 | NF-κB | CTL | NF-κB |
| ENSRNOG00000030251 | RT1-CE10 protein | 0.996647 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000030712 | RT1 class Ia, locus A1 | 0.996479 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000005438 | Neuroendocrine convertase 2 precursor | 0.995956 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000032707 | Pro-epidermal growth factor precursor | 0.993999 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000016346 | Protein kinase C, delta type | 0.9938 | NF-κB | NF-κB | CTL |
| ENSRNOG00000006268 | Interferon beta precursor | 0.99279 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000016630 | Tln_predicted protein. | 0.989963 | NF-κB | CTL | NF-κB |
| ENSRNOG00000019080 | hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 | 0.987715 | NF-κB | NF-κB | NF-κB |
| ENSRNOG00000031607 | RT1 class I, CE4 | 0.986733 | NF-κB | CTL | NF-κB |
| ENSRNOG00000004148 | Serine/threonine-protein kinase PCTAIRE-2 | 0.98582 | CTL | NF-κB | NF-κB |
| ENSRNOG00000028387 | START domain containing 3 | 0.985143 | NF-κB | CTL | NA |
| ENSRNOG00000003743 | Aspartyl-tRNA synthetase | 0.984986 | NF-κB | CTL | CTL |
| ENSRNOG00000016588 | myeloid-associated differentiation marker | 0.983779 | NF-κB | NA | NF-κB |
Known NF-κB target genes are in bold; Prob.: Posterior probability for NF-κB regulation; NF-κB: the homolog gene is predicted as an NF-κB target; CTL: the homolog gene is predicted as a non NF-κB target; NA: upstream sequence of the homolog gene not available.