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. 2007 Mar 5;104(11):4536–4541. doi: 10.1073/pnas.0611456104

Table 1.

Summary of sRNA sequences used in this study

Wild type nrpd1a/1b nrpd2a/2b F1*
RAW sequences 76,772 106,905 72,604 78,293
Perfectly matched to genome 56,170 (73.2%) 78,067 (73.0%) 49,017 (67.5%) 55,070 (70.3%)
Filtered out 404 (0.5%) 2,361 (0.2%) 1,145 (0.2%) 932 (0.1%)
miRNAs 10,408 (18.7%)§ 54,501 (72.0%)§ 32,082 (67.0%)§ 8,416 (15.5%)§
tasiRNA 799 (1.4%)§ 4,491 (5.9%)§ 2,561 (5.3%)§ 959 (1.8%)§
siRNAs 44,559 (79.9%)§ 16,714 (22.1%)§ 13,229 (27.6%)§ 44,763 (82.7%)§

*From the cross nrpd1a/1b X nrpd2a/2b.

As percentage of raw sequences.

Matched abundant cellular RNAs such as tRNAs.

§As percentage of perfect matches to the genome and excluding those that were filtered out.

May contain unidentified miRNAs and tasiRNAs.

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