Table 2.
Putative Homology and Identities of cDNA Differentially Expressed in VArasmut Cells.
| Number | Expression Change | Homology | Base Pairs Submitted to BLAST | GenBank Accession Number | Identities | |
| Upregulated | ||||||
| 1 | * | Collagen, type I, α 1 | 534 | NM_000088 | Human 290/309 (93%) | |
| 2 | * | CK19 gene | 454 | X04198 | Bovine 149/151 (98%) | |
| 3 | * | Keratin 7 | 320 | BC002700 | Human 135/146 (92%) | |
| 4 | * | Osteonectin | 451 | J03233 | Bovine 194/195 (99%) | |
| 5 | † | 40-kDa keratin intermediate filament precursor gene | 429 | J03607 | Human 188/204 (92%) | |
| 6 | † | Keratin 18 | 365 | NM_000224 | Human 154/176 (87%) | |
| 7 | † | Myosin regulatory light chain | 377 | D82057 | Human 173/185 (93%) | |
| 8 | ‡ | α | Enolase mRNA | 433 | AF149256 | Bovine 193/201 (96%) |
| 9 | ‡ | Clathrin heavy chain | 549 | U31757 | Bovine 283/285 (99%) | |
| 10 | ‡ | EST | 336 | CB446148 | Bovine 207/237 (87%) | |
| 11 | ‡ | EST | 360 | CB464940 | Bovine 180/196 (91%) | |
| 12 | ‡ | Hypothetical protein MGC10731 | 540 | NM_030907 | Human 161/185 (87%) | |
| 13 | ‡ | Hypothetical protein MGC2963 | 700 | NM_031298 | Human 331/359 (92%) | |
| 14 | ‡ | Mitochondrial ribosomal protein S34 | 560 | NM_023936 | Human 312/365 (85%) | |
| 15 | ‡ | Procollagen, type V, α 2 | 458 | XM_193986 | Mouse 107/125 (85%) | |
| 16 | ‡ | Ribosomal protein L26 | 372 | AB093679 | Primate 112/137 (81%) | |
| Downregulated | ||||||
| 1 | * | Breast basic conserved 1 | 433 | AF192977 | Ovine 184/190 (96%) | |
| 2 | * | Ezrin | 576 | M98498 | Bovine 414/415 (99%) | |
| 3 | * | MHC class 1 protein molecule D18.3 | 463 | Y09207 | Bovine 266/266 (100%) | |
| 4 | * | Proliferating cell nuclear antigen | 550 | AF416380 | Ovine 304/318 (95%) | |
| 5 | * | Ribosomal protein S5 | 686 | BC018828 | Human 275/324 (84%) | |
| 6 | † | ADP/ATP translocase T2 | 367 | M24103 | Bovine 159/160 (99%) | |
| 7 | † | Apolipoprotein A-I | 520 | M35870 | Bovine 316/322 (98%) | |
| 8 | † | β Actin | 469 | AF129289 | Ovine 175/186 (94%) | |
| 9 | † | Chromosome 21 open reading frame 59 (C21orf59) | 664 | NM_021254 | Human 433/494 (87%) | |
| 10 | † | Epsin 1 | 577 | NM_057136 | Rat 461/515 (89%) | |
| 11 | † | EST | 272 | BM433009 | Bovine 134/142 (94%) | |
| 12 | † | Glioma-tumor-suppressor candidate region gene 2 | 413 | BC013307 | Human 199/235 (84%) | |
| 13 | † | Ribosomal protein L30 | 277 | AF063243 | Bovine 112/113 (99%) | |
| 14 | † | Squamous cell carcinoma antigen recognized by T cells 1 | 537 | BC028823 | Mouse 264/310 (85%) | |
| 15 | ‡ | EST | 443 | AV609800 | Bovine 226/228 (99%) | |
| 16 | ‡ | EST | 575 | BE751110 | Bovine 469/475 (98%) | |
| 17 | ‡ | EST | 523 | CB462154 | Bovine 309/324 (95%) | |
| 18 | ‡ | Ribosomal protein S19 | 324 | BC018616 | Human 145/153 (94%) | |
*Expression change, > 5-fold.
†Expression change, > 3-fold.
‡Expression change, > 2-fold.