TABLE 2.
Sequences of primers used in this study
Primer | Sequence (5′→3′) | Location | No. as shown in Fig. 1 |
---|---|---|---|
ISEcp1A | GCAGGTCTTTTTCTGCTCC | ISEcp1B transposase | 1 |
ISEcp1B | TTTCCGCAGCACCGTTTGC | ISEcp1B transposase, reverse primer | 2 |
PRECTX-M-3B | CCGTTTCCGCTATTACAAAC | 3′ end of blaCTX-M, reverse primer | 3 |
PROM+ | TGCTCTGTGGATAACTTGC | Right part of ISEcp1B including −35 and −10 promoter sequences | 4 |
PROM− | GCAGTCTAAATTCTTCGTG | Right part of ISEcp1B lacking −35 and −10 promoter sequences | 5 |
CTX-M-REV | CCGCGAACATCATCCGTTGC | 5′ end of blaCTX-M-19, reverse primer for primer extension experiments | 6 |
IS903-A | CATATGAAATCATCTGCGC | IS903D transposase | 7 |
IS903-B | CCGTAGCGGGTTGTGTTTTC | IS903D transposase, reverse primer | 8 |
INT2F | TCTCGGGTAACATCAAGGCCC | 3′ end of the int11 integrase gene | 9 |
3′-CS | AAGCAGACTTGACCTGA | 5′ end of the qacEΔ1 gene, reverse primer | 10 |
CTX-MA | ACCGCGATATCGTTGGT | blaCTX-M-19 gene | 11 |
CTX-MB | CGCTTTGCGATGTGCAG | blaCTX-M-19 gene, reverse primer | 12 |
ORF1B | ATACTCTTGCTCATATGGGG | 5′ end of ORF1 of Tn1721, reverse primer | 13 |