TABLE 1.
Summary of sequences reacting with rat sera and cells
| Assigned no. | Peptide position | Peptide sequence | ProPred scorea | Epivax scoreb | Peptide with greatest homologyc |
|---|---|---|---|---|---|
| 5 | 438-457 | DANFDSIRVDAEDNVDADQL | 6 | 0 | CAT27 |
| 6 | 478-498 | NNHVSIVEAWSDNDTPYLHD | 0 | 0 | EAW21 |
| 7 | 502-521 | LMNMDNKFRLSMLWSLAKPT | 43 | 31 | |
| 9 | 548-567 | VPSYSFARAHDSEVQDIIRD | 5 | 0 | HDS21 |
| 11 | 847-866 | VVIANNDKFVSWGITDFEM | 43 | 22 | |
| 16 | 1376-1395 | SGALRFYNLKGQLVTGSGWY | 44 | 14 |
a
ProPred scores (19) describe the number of MHC class II alleles predicted to bind with the sequences out of a possible total of 51.
b
Epimatrix scores (15) provided as “hits,” with higher hits having greater probability of binding.
c
Previously identified peptide to which sequence shows greatest homology.