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. 2006 Dec 11;75(3):1310–1317. doi: 10.1128/IAI.00996-06

TABLE 1.

Oligonucleotide primers used for amplification

S. agalactiae reference strain (reference[s]) Gene in reference strain Name of primer Sequence (5′-3′) Amplified gene(s)
176H4A (25) fbsA fbsA86 ATCAAGTCCTGTATCTGCTAT fbsA
fbsA555rc TTCATTGCGTCTCAAACCG
fbsA282 CAACTTATAGGGAAAAATCCAC fbsA and truncated fbsA
fbsA405rc AGTTAACATCGGTCTATTAGC
NEM316 (12, 13) gbs0850 fbsB349 ATGAAGCGATTGTGAATAGAA fbsBa
fbsB1926rc TCGCCTTGATAGCAGTGTC
fbsB143 TCGGTCATAAAATAGCGTATGG fbsBa
fbsB1710rc AAGAATTCAACGGTCGGCTTCGT
4:74 (15) fgag fgag ACGATGCTATTTCGGCGTAT fbsBa and all fgag variants
fgagrc AAGAATTCAACGGTCGGCTTCGT
090R (28) lmb lmb130 GTTGTGAGTTTAGTAATGATAGCGA lmb
lmb970rc TATGTCTTGTTCCGCTTG
BM110 (17, 20) gbs2018 ST-17S ATACAAATTCTGCTGACTACCG gbs2018-ST-17b
ST-17AS TTAAATCCTTCCTGACCATTCC
NEM316 (12, 17) dltR dltRS TTGACAGGTCTCTATGATTTAGTC dltR
dltRAS GTCTGGTTCTCAGCCTAATTC
a

fbsB is fbsB gene sensu stricto as described by Gutekunst et al. (13), also known as fgagV2 (15) or fbsB2 (5).

b

gbs2018-ST-17 is an allelic form of the gbs2018 gene, specific for the ST-17 clone (17).