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. 2000 Apr 11;97(9):4643–4648. doi: 10.1073/pnas.080064797

Table 1.

The distance from the oxygen atom of each threonine residue to the nearest atom of the retinal chromophore (identified with the numbering convention in Scheme S1)

Residue Average distance, Å* Distance, Å
2BRD [5] 2AT9 [7] 1QHJ [9] 1C3W [11] 1BRR [12] 1BM1 [13]
Thr-17 11.74  ± 0.63 Cɛ: 11.52 Cδ: 12.90 Cδ: 11.70 Cδ: 11.56 Cγ: 11.72 Cɛ: 11.01
Thr-24 8.97  ± 1.32 Cδ: 11.52 Cγ: 9.25 Cδ: 8.28 Cδ: 8.42 Cδ: 8.31 Cδ: 8.04
Thr-46 7.25  ± 0.95 Cγ: 7.25 Cγ: 9.29 Cγ: 9.88 Cγ: 9.76 Cγ: 9.13 Cγ: 9.32
Thr-47 11.39  ± 0.42 Cγ: 10.68 Cγ: 11.65 Cγ: 11.69 Cγ: 11.66 Cγ: 11.59 Cγ: 11.04
Thr-55 10.50  ± 0.69 Cδ: 10.03 Cɛ: 10.93 Cɛ: 9.70 Cɛ: 9.94 Cδ: 11.36 Cδ: 11.02
Thr-89 3.62  ± 0.30 Cδ: 3.53 C15: 3.64 Cɛ: 3.32 Cɛ: 3.33 Cɛ: 4.12 Cδ: 3.75
Thr-90 5.09  ± 1.01 C11: 3.65 C12: 6.00 C11: 5.67 C11: 5.58 C11: 5.68 C12: 3.95
Thr-121 7.73  ± 1.43 C4: 9.28 C4: 6.50 C2: 6.52 C3: 6.30 C2: 8.66 C4: 9.12
Thr-142 4.20  ± 0.71 5-Me: 5.14 5-Me: 3.90 5-Me: 3.67 C4: 3.50 C4: 3.96 5-Me: 5.05
Thr-178 7.64  ± 0.58 13-Me: 7.64 9-Me: 7.50 13-Me: 7.35 13-Me: 7.35 13-Me: 8.79 13-Me: 7.23
Thr-205 12.72  ± 0.60 1-Me: 13.40 N: 11.79 1-Me: 12.96 1-Me: 12.67 1-Me: 13.20 1-Me: 12.28

*Average distances are shown ± SD and are taken from the six structures. 

Cryoelectron microscopy. 

X-ray crystallography.