Table 2.
QTL results for a subset of genes pertaining to a QTL hotspot localised around marker D6Mit254 (chr. 6).
| Gene | -log10 P-value of QTL (model 1) a,b | Best transcript | P-value of best transcripta | Position of QTL (model 2)c | -log10 P-value of QTL (model 2) a,d |
| Reln | 4.4 | 0610039D01Rik | 30.0 | S05Gnf018.190 | 21.0 |
| Chrng | 4.1 | Gpx1 | 32.3 | D6Mit254 | 5.6 |
| Slc6a1 | 3.7 | Mad2l1 | 35.5 | D6Mit254 | 5.9 |
| Calm4 | 3.6 | Adprhl2 | 37.8 | S17Gnf094.470 | 7.2 |
| Mapk6 | 3.5 | Tusc2 | 41.7 | D6Mit254 | 10.9 |
| Adra2b | 3.3 | Sox11 | 30.9 | S04Gnf147.400 | 3.6 |
| Mapk1 | 3.3 | 1110011K10Rik | 34.4 | D6Mit254 | 6.2 |
| Gad1 | 3.0 | Bzrp | 45.3 | D6Mit254 | 3.2 |
| Htr4 | 2.5 | Hbb-b2 | 45.5 | D18Mit19 | 11.7 |
a Values reported are -log10 (P-value), that is a value of x means that significance is 10-x.
b P-value when only the marker is included in the model.
c QTL position when the best transcript is also included in the model.
d QTL P-value when the best transcript is also included in the model.