TABLE 3.
Species and distribution of PhP MTs found in different sampling sites
| Species and PhP MT (na) | Species and biovar or HG identified by:
|
Distribution | |
|---|---|---|---|
| PhP typing | FAME and AFLPb | ||
| A. hydrophila | |||
| A (19) | Unknown | A. hydrophila, HG1 | Child diarrhea |
| B (145) | A. hydrophila | A. hydrophila, HG1 | Human, sewage, lagoon, fish pond, fish, control |
| C (107) | A. hydrophila | A. hydrophila, HG1 | Child diarrhea, sewage, lagoon, fish pond, fish |
| D (23) | A. hydrophila | A. hydrophila, HG1 | Sewage, lagoon, fish pond |
| E (21) | A. hydrophila | A. hydrophila, HG1 | Human, fish pond, control |
| A. veronii | |||
| F (45) | A. veronii biovar sobria | A. veronii, HG8/10 | Sewage, lagoon, fishpond, fish, control |
| G (131) | Unknown | A. veronii, HG8/10 | Child diarrhea, sewage, lagoon, fish pond, fish |
| H (46) | A. veronii biovar sobria | A. veronii, HG8/10 | Sewage, fish pond, fish |
| I (21) | A. veronii biovar sobria | A. veronii, HG8/10 | Lagoon, fish pond, fish |
| J (25) | A. veronii biovar sobria | A. veronii, HG8/10 | Human, sewage, fish pond, fish |
| K (33) | A. veronii biovar sobria | A. veronii, HG8/10 | Human, lagoon, fish pond |
| L (26) | A. veronii biovar sobria | A. veronii, HG8/10 | Lagoon, fish pond, fish |
| M (23) | A. veronii biovar sobria | A. veronii, HG8/10 | Sewage, lagoon, fish pond |
| N (22) | A. veronii biovar sobria | A. veronii, HG8/10 | Fish pond, fish, control |
| O (29) | A. veronii biovar sobria | A. veronii, HG8/10 | Sewage, fish pond, control |
| A. caviae | |||
| P (59) | A. caviae, HG5A | A. caviae, HG4 | Human, sewage, lagoon, fish pond, control |
| Q (29) | A. caviae, HG5A | A. caviae, HG4-like | Child diarrhea, sewage, lagoon, fish |
| R (37) | A. caviae, HG5A | A. caviae, HG4 | Human, sewage, fish |
a
n, no. of isolates.
b
Species obtained by comparing AFLP profiles with the AEROLIB database.