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. 2007 Mar 5;8:74. doi: 10.1186/1471-2105-8-74

Table 7.

Classification Results for Colon Data set

Number of Genes

Ranking 8 16 32
Univariate (One-Dimensional) Ranking
P-value (P-val) 84.4 88.8 88.6
Fold-Change (FC) 86.9 87.3 88.5
Frequency (Freq) 89.6 89.9 91.9

Two-Dimensional Ranking
P-val & FC (1) 88.7 88.8 90.0
P-val & FC (2) 88.7 88.7 88.8
P-val & FC (3) 86.6 88.7 88.7
P-val & Freq (1) 88.9 89.7 89.9
P-val & Freq (2) 89.1 86.7 90.5
P-val & Freq (3) 89.8 90.4 90.6
FC & Freq (1) 88.3 89.9 91.4
FC & Freq (2) 87.2 88.1 91.9
FC & Freq (3) 88.7 90.0 91.5

Three-Dimensional Ranking
P-val & FC & Freq (1) 86.3 89.0 90.3
P-val & FC & Freq (2) 88.4 89.1 89.8
P-val & FC & Freq (3) 88.7 86.7 90.5

Gene ID, p-value, fold-change, and the layer assigned by the (1) point-admissible, (2) convex, and (3) Pareto algorithms for 70 genes selected based on the p-value 0.001 and 2.0-fold as the cutoff from the 2,000 genes in the colon data set. The p-values are computed based on 50,000 permutations.