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Ampliconic locations of Y genes, chromosomal locations (stratum) of X gametologs, XY or YL synonymous divergences, and heights of nodes estimated in linearized trees
(P) Palindrome; (IR) inverted repeat; [XY (YL)] the extent of synonymous divergences between gametologous X and Y (Y and L) copies with multiple-hit correction; (Y0–Y4) nodes and heights (h) in the linearized tree.
