Table 2.
Genetic variability parameters of Tnt1-like sequences of Solanum wild and cultivated genotypes
| code | Domest. | total | unique | size bp | π JC | I | II | III | premature | no stop/cod | |
| bre | wild | 25 | 13 | 52% | 456(± 7) | 0,057 | 13 | - | - | 1 | 5 |
| cmm | 3 | 3 | 100% | 423(± 5) | 0,093 | 1 | 2 | - | - | - | |
| chc | 1 | 1 | 100% | 428 | - | 1 | - | - | - | - | |
| tar | 15 | 9 | 60% | 422(± 14) | 0,038 | 1 | 8 | - | 1 | - | |
| mga | 17 | 10 | 58% | 439(± 19) | 0,171 | 6 | 3 | 1 | - | - | |
| sat | 7 | 6 | 85% | 440(± 4) | 0,069 | 4 | 2 | - | - | - | |
| inf | 23 | 10 | 43% | 428(± 9) | 0,053 | 4 | 6 | - | 2 | - | |
| dds | 1 | 1 | 100% | 435 | - | 1 | - | - | 1 | - | |
| lph | 1 | 1 | 100% | 436 | - | 1 | - | - | - | - | |
| mcd | 2 | 2 | 100% | 428(± 11) | 0,078 | 1 | 1 | - | - | - | |
| opl | 2 | 2 | 100% | 419(± 2) | - | - | 2 | - | 1 | - | |
| scr | 12 | 12 | 100% | 463(± 11) | 0,132 | 6 | 5 | 1 | 1 | 1 | |
| gou | 3 | 3 | 100% | 430(± 8) | 0,093 | 2 | 1 | - | 1 | - | |
| ha | 19 | 12 | 63% | 428(± 9) | 0,249 | 2 | 7 | 3 | - | - | |
| inc | 21 | 11 | 52% | 421(± 4) | 0,041 | 2 | 9 | - | 3 | - | |
| ktz | 18 | 14 | 77% | 443(± 8) | 0,287 | 7 | - | 7 | - | - | |
| oka | 16 | 7 | 43% | 434(± 10) | 0,273 | 2 | 3 | 2 | - | - | |
| spg | 20 | 9 | 45% | 433(± 7) | 0,055 | 5 | 4 | - | 3 | - | |
| vrn | 12 | 4 | 27% | 429(± 9) | 0,072 | 2 | 2 | - | - | - | |
| Ke | cult. | 8 | 8 | 100% | 426(± 14) | 0,078 | 2 | 6 | - | - | - |
| Hu | 4 | 4 | 100% | 421 | 0,026 | - | 4 | - | - | - | |
| Cha | 23 | 17 | 74% | 424(± 7) | 0,064 | 7 | 10 | - | - | - | |
| Mo | 29 | 17 | 58% | 423(± 6) | 0,057 | 6 | 11 | - | - | - | |
| Tu | 17 | 14 | 82% | 428(± 10) | 0,058 | 8 | 6 | - | - | - | |
| acl | wild | 18 | 7 | 38% | 419(± 19) | 0,191 | 3 | 3 | 1 | - | 4 |
| total | 317 | 197 | 62% | 87 | 95 | 15 | 14 | 10 | |||
Note. Code refers to the codes use in table 1 for each species and cultivars. Domestication (Domest.) status: wild or cultivated (cult.) genotypes. Total: indicates total number of sequences obtained; unique genotypes: total number of different sequences and percentage; size: average fragment size in bp (size variation); πJC indicates nucleotide diversity with Jukes and Castor's (1969) correction; I, II and III refers to the sequence identity group obtained from the tree presented in figure 3 and numbers in these columns indicates numbers of sequences; premature: refers to number of sequences with premature stop codon and no stop/cod: refers to number of sequences with no stop codon in the RNAseH domain.