Table 7.
Other repair related proteins in C. crescentus
| Genes in E. coli | Description | Orthologs in C. crescentus | Similarity with E. coli a |
| dcm (472 aa) | DNA-cytosine methyltransferase | CC3626 | 158/395 (40%) |
| dinG (716 aa) | probably ATP-dependent helicase | CC2038 | 213/479 (44%) |
| dinB (pol IV) (351 aa) | Polymerase IV (damage-inducible protein B) | CC2466 | 185/320 (57%) |
| dnaE (1160 aa) | subunit of DNA polymerase III | 1- CC1926; 2-CC3211 |
659/1121 (58%) 503/1090 (46%) |
| dut (151 aa) | dUTPase | CC3713 | 86/136 (63%) |
| lexA (202 aa) | regulator for SOS regulon | CC1902 | 110/205 (54%) |
| lhr (1538 aa) | Lhr-like helicases | CC2040 | 373/973 (41%) |
| lig (671 aa) | DNA ligase | 1-CC1522 NAD-dependent 2-CC3610 ATP-dependent |
427/678 (63%) absent |
| mutT (129 aa) | mutT/NUDIX family | 1-CC0833 2-CC3382 3-CC0407 4-CC0418 5-CC1554 6-CC1126 7-CC3440 8-CC1346 9-CC3650 10-CC0266 11-CC2652 |
69/124 (55%) 47/91 (51%) 38/64* (59%) 32/60* (53%) 41/95 (43%) 33/69 (47%) 46/102 (45%) 27/56* (48%) 28/59* (47%) 22/45* (48%) 17/23* (73%) |
| polB (783aa) | DNA polymerase II | absent | |
| radC (222 aa) | DNA repair protein | 1-CC2680 2-CC2744 |
101/172 (58%) 38/56* (67%) |
| umuC/umuD | pol V, Y-family DNA polymerase | absent | |
| absent | imuA | CC3213 | |
| absent | imuB, Y-family DNA polymerase | CC3212 |
a. numbers indicate similarity within local alignment in aminoacids (aa). * These genes have coverage lower than 50%.