TABLE 1.
Genetic variation of microsatellite loci for 13 populations of D. ananassae
Mean n | Mean He | Variance in repeat unit | Average no. of alleles | Average minimum repeat units | Mean repeat units | Average maximum repeat units | Mean D′ | % D′ significant P < 0.05 subgroups
|
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---|---|---|---|---|---|---|---|---|---|---|---|
Population | Total | 1 | 2 | ||||||||
Kathmandu | 16.87 | 0.61 | 14.17 | 4.65 | 5.70 | 10.77 | 17.04 | 0.74 | 21.0 | 2.5a | 0.65b |
Mandalay | 6.86 | 0.42 | 10.73 | 2.30 | 6.26 | 10.05 | 11.70 | 0.71 | 15.0 | — | — |
Bhubaneshwar | 7.61 | 0.55 | 3.88 | 3.17 | 8.17 | 10.19 | 12.17 | 0.82 | 0.58 | — | — |
Puri | 17.87 | 0.58 | 7.83 | 4.86 | 7.28 | 10.67 | 14.63 | 0.67 | 1.6 | — | — |
Hyderabad | 13.74 | 0.59 | 5.85 | 4.52 | 7.04 | 10.55 | 13.99 | 0.76 | 6.2 | — | — |
Chennai | 19.48 | 0.61 | 8.43 | 4.96 | 6.13 | 10.51 | 15.78 | 0.59 | 5.15 | — | — |
Colombo | 6.0 | 0.47 | 9.97 | 2.56 | 7.56 | 10.71 | 12.71 | 0.91 | 0.65 | — | — |
Bogor | 25.91 | 0.62 | 10.53 | 6.82 | 5.82 | 11.60 | 16.73 | 0.69 | 3.5 | — | — |
Darwin | 8.96 | 0.52 | 8.95 | 3.17 | 8.61 | 10.96 | 14.63 | 0.82 | 0.28 | — | — |
Thursday Island | 40.95 | 0.61 | 4.19 | 6.30 | 6.19 | 10.36 | 13.43 | 0.58 | 51.5 | 18.8c | 3.9d |
Trinity Beach | 47.83 | 0.60 | 4.13 | 6.52 | 6.19 | 10.48 | 13.47 | 0.61 | 44.7 | 4.7c | 11.2e |
Apia | 37.82 | 0.57 | 4.81 | 6.30 | 6.15 | 9.80 | 13.82 | 0.60 | 10.2 | 8.9f | — |
Malololelei | 20.95 | 0.51 | 4.15 | 4.81 | 7.33 | 11.29 | 13.52 | 0.73 | 4.2 | — | — |
“Mean n,” average number of chromosomes sampled; “Mean He,” expected heterozygosity; Mean D′, average LD for all pairwise comparisons of loci; “% LD significant P < 0.05,” percentage of pairwise comparisons between loci with probability of <5% on the basis of an unbiased estimate of the exact P-value of a contingency table using the permutation test of Raymond and Rousset (1995).
Blue subgroup, D′ = 0.78 (Figure 3).
Lavender subgroup, D′ = 0.81 (Figure 3).
Red subgroup, D′ = 0.60 (Figure 3).
Tan subgroup, D′ = 0.66 (Figure 3).
Tan subgroup; D′ = 0.69 (Figure 3).
Light blue subgroup, D′ = 0.59 (Figure3).