Table 1.
Abundance of discrete MPSS signatures and their classification in three MPSS libraries derived from inner ear tissues.
| All Signatures | Unique Signatures | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signature Class | Summarized Class Description | MoSV | MoCR | MoVB | Combined Inner Ear | MoSV | MoCR | MoVB | Combined Inner Ear |
| 0 | Repetitive | 271 | 281 | 177 | 409 | 7 | 10 | 5 | 27 |
| 1–6 | Known Gene, Sense Orientation | 9,466 | 10,302 | 8,286 | 15,897 | 622 | 711 | 243 | 1,742 |
| 11–16 | Known Gene, Antisense Orientation | 1,644 | 1,902 | 653 | 3,460 | 544 | 716 | 99 | 1,459 |
| 22–26 | Known Gene, Orientation Ambiguous | 977 | 1,134 | 720 | 2,145 | 179 | 220 | 93 | 549 |
| 1000 | Genome Only | 1,985 | 2,643 | 1,787 | 5,712 | 773 | 1,085 | 783 | 2,748 |
| -- | Unclassifiable | 816 | 935 | 658 | 2,049 | 416 | 496 | 318 | 1,323 |
| Total | 15,159 | 17,197 | 12,281 | 29,672 | 2,541 | 3,238 | 1,541 | 7,848 | |
Numbers are signatures with tpm > 3. Unique signatures are those that have a maximum tpm < 4 in any mouse library in the MRT, excluding testis (MoTe.Male) or day 18 embryo (MoEm.MF18). Numbers in the “combined inner ear” column are not the sum of the three inner ear library totals because some signatures occur in multiple libraries.