Table 3.
Selected MPSS signatures described in this paper.
| Signature abundance in transcripts per millin (tpm) | |||||||
|---|---|---|---|---|---|---|---|
| Locus | Signature | Class | Notes | MoVB | MoCR | MoSV | MRT* |
| Chrna9 | GATCTGGTGTGGAGGCCGGA | 4 | exon 3 | 0 | 8 | 0 | 0 |
| GATCCCCCAGAATACTGACA | 4 | exon 5 | 0 | 0 | 0 | 27 (Thymus.F) | |
| Myo15a | GATCTGCTCCGGCGTCACAC | 2 | 445 | 3 | 0 | 284 (Pituitary.M) | |
| Pres | GATCTGACAGGCAAGGCAGG | 1000 | ~2.5 kb 3′ to Pres | 0 | 232 | 0 | 42 (Brain.Amygdala.F) |
| GATCTCCTTTTTCTTCTAAC | 1000 | ~6 kb 3′ to Pres | 0 | 6 | 0 | 0 | |
| GM414 (Otolin-1) | GATCAAGTGTGGCTGGAAGT | 1000 | coding sequence | 482 | 13 | 54 | 6 (EmbryoE18.M/F) |
| GATCCTCTGCTAGTTGGTTC | 1000 | reverse | 60 | 20 | 0 | 0 | |
| GATCCATGTTTGTGTCTGTT | 1000 | reverse | 53 | 0 | 0 | 0 | |
| GATCGCCTTCTATCCTAAGG | 1000 | ~3 kb 3′ to GM414 | 51 | 1 | 19 | 0 | |
| Scg2 | GATCTGCTTCACTTATTCTG | 1 | 7 | 0 | 228 | 1211 (Pituitary.F) | |
| GATCAGGGCTTTGGAGTACA | 4 | 0 | 0 | 830 | 2466 (Pituitary.M) | ||
| Umodl1 (Olfactorin) | GATCATCTGGGGGAAACGAG | last coding exon | 0 | 120 | 0 | 0 | |
| Otof | GATCTACCGAGGCAGTGCCA | 4 | short isoform of Otoferlin | 41 | 6 | 0 | 0 |
| A430025D11Rik | GATCCTAAAGCTCAGAGAGG | 1 | 160 | 0 | 0 | 0 | |
| Cib3 | GATCCTGCGAGCTCCAGACT | 1 | 675 | 0 | 0 | 0 | |
| 1110017I16Rik LOC68527 | GATCGAAGCATAAAGGTTTT | 1 | 1037 | 59 | 259 | 17 (Cartilage.xiphoid.M) | |
*
Maximum tpm in the MRT, name of library, if any, given in parentheses.