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. Author manuscript; available in PMC: 2007 Apr 5.
Published in final edited form as: Radiat Res. 2006 Jul;166(1 Pt 1):1–8. doi: 10.1667/RR3585.1

TABLE 2.

Predicted and Observed Distribution of Radicals Trapped on the Components of DNA

1
2
3
4
5
6
7
8
9
DNA components at different Γ No. bound e (′) Bound e (%) Initial hole distribution (%) Initial e adduct distribution (%) Predicted initial free radical distribution (%) Neglect outer shell free radical (%) Renormalize (%) Observed free radical distribution (%) Calculated free radical distribution (%)
Γ = 2.5
Bases 48 35 17 50 67 67 67 89 89
Sugar-phosphate 63 45 23 0 23 23 23 11 11
Solvent shell,a Γ ≤ 10 28 20 10 0 10 10 10
 Sum 139 100 50 50 100 100 100 100 100
Γ = 7.5
Bases 48 27 13 50 63 63 63 88
Sugar-phosphate 63 35 18 0 18 18 18 12
Solvent shell,a Γ ≤ 10 68 38 19 0 19 19 19
 Sum 179 100 50 50 100 100 100 100
Γ = 11.5
Bases 48 23 11 50 61 61 63 89 88
Sugar-phosphate 63 30 15 0 15 15 15 11 12
Solvent shell,a Γ ≤ 10 88 42 21 0 21 21 21
Solvent shell, Γ > 10 12 6 3 3 b
 Sum 211 100 50 50 100 97 100 100 100
Γ = 15.0
Bases 48 20 10 50 60 60 65 88
Sugar-phosphate 63 26 13 0 13 13 14 12
Solvent shell,a Γ ≤ 10 88 37 18 0 18 18 20
Solvent shell, Γ > 10 40 17 8 8 b
 Sum 239 100 50 50 100 92 100 100
Γ = 22.5
Bases 48 16 8 50 58 58 70 90 90
Sugar-phosphate 63 21 11 0 11 11 13 10 10
Solvent shell,a Γ ≤ 10 88 29 15 0 15 15 18
Solvent shell, Γ > 10 100 33 17 17 b
 Sum 299 100 50 50 100 83 100 100 100
a

The inner solvent shell, Γ ≤ 10, includes the sodium counterion.

b

It is assumed that holes formed in the outer solvation shell (Γ > 10) do no transfer to the DNA (7, 9).