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. 2007 Mar 28;7:17. doi: 10.1186/1472-6807-7-17

Table 1.

Data for the superposition in Fig. 3

PDB-ID Name SOURCE SPECIES FOLD SUBGROUP NO. OF ALIGNED RESIDUES RMSD TO HMFA [Å]
1B67 A+B HmfA Methanothermus fervidus Histone Archaeal 124/124 0.00
1TAF A+B TAFII42/62 Drosophila melanogaster Histone TBP-associated factors 124/132 1.19
1TZY A+B H2A/H2B Gallus gallus Histone Nucleosome core 118/129 1.33
1TZY C+D H3/H4 Gallus gallus Histone Nucleosome core 114/134 1.10
1IN4 A RuvB Thermotoga maritima C-domain AAA+: helicases 46/71 1.38
1R6B A ClpA-D1 Escherichia coli C-domain AAA+: Clp-D1 52/86 1.70
1LV7 A FtsH Escherichia coli C-domain AAA+: AAA 45/71 1.21
1NY5 A NtrC Aquifex aeolicus C-domain AAA+: σ 54 52/72 1.57
1G8P A Mg chelatase Rhodobacter capsulatus C-domain AAA+ a) 12/16(α 1)
b) 47/54(α 2–4)
a) 0.59
b) 1.38
1K6K A ClpA-N (1st half) Escherichia coli Clp N-domain ClpA 33/78 1.54
1K6K A ClpA-N (2nd half) Escherichia coli Clp N-domain ClpA 33/62 1.40
1KHY A ClpB-N (1st half) Escherichia coli Clp N-domain ClpB 33/80 1.13
1KHY A ClpB-N (2nd half) Escherichia coli Clp N-domain ClpB 33/58 0.96