Table 1.
Form | Space group | DNA | Cell dimensions | Crystallization conditions | pH |
---|---|---|---|---|---|
Nonspecific* | P21 | CGAGCTCG | a = 68.4 Å; b = 79.6 Å; c = 66.4 Å; β = 104.6° | 0.02 M Mes 0.1 M NaCl 1.0–1.5% PEG 4,000 | 6.0 |
I. Cognate* | C2221 | GGGATATCCC | a = 60.2 Å; b = 78.4 Å; c = 371.3 Å | 0.01 M sodium phosphate 0.08 M NaCl 2.5–3.5% PEG 4,000 | 7.0 |
II. Cognate | C2221 | GAAGATATCTTC | a = 72.6 Å; b = 120.4 Å; c = 182.7 Å | 1.5 M ammonium sulfate | 5.0 |
III. Cognate† | P1 | AAAGATATCTT | a = 49.2 Å; b = 50.4 Å; c = 64.1 Å; α = 96.4°; β = 108.9°; γ = 108.5° | 0.1 M Hepes 0.15 M NaCl 10% PEG 4,000 | 7.5 |
IV. Cognate | P41212 | AAGATATCTTA | a = b = 66.1 Å; c = 299.3 Å | 0.1 M acetate 0.2 M Na, K tartrate 10% PEG 4,000 | 4.5 |
PEG, polyethylene glycol.
From ref. 9. For the nonspecific complex, the hexameric site is 5′-TCGCGA, arising from two abutted 8-mer DNA duplexes. The central phosphates at the GC step are thus missing in this complex. Both form I and the nonspecific complex are determined at 3.0-Å resolution.