Table VI.
Candidate gene characteristics
*, Primers and restriction sites used for PCR markers are as follows: MDHAR1, GGAACCAAAGAGGAGTATGAGGC and CGACGTGTAAAAATCTTCCGTGGGG, PvuII site. MDHAR2, GCCATATGCACCATATGAACGTCC and CCCTTGTTCCTTGTACCAATCAGG, TaqI site. MDHAR3, GGGCAAGTTGAAGAGGAGAAGGG and GGAAAAGTGGCAACATCACCC, HinfI site. DHAR2, GGGCAAAGAACTGTCTTACAGCC and GCCACTTCCACAAGTCATTGGACC, size polymorphism. APX, CCTTACTGGCACCTGAGGTGCG and GCTCCACAAAGTATGAGTTGTC, SspI site. VTC2, GCTTATTACGTACAGTTGTATC and CCAGTTAGATAGACTTGGTTTAG, AluI site. **, Mapping of two independent clones gave the same profiles.
Gene | Function | TC No. | Clone No. | Tomato Library | Marker | Bin |
---|---|---|---|---|---|---|
GMP1 | GDP-Man pyrophosphorylase | TC99113 | cLEM8J23 | Immature green | RFLP** | 3-D |
TC99112 | cLEG62O22 | Fruit/breaker fruit | ||||
GMP2 | GDP-Man pyrophosphorylase | TC110163 | cLEM7F10 | Immature green fruit | RFLP | 9-E |
GME1 | GDP-Man epimerase | TC99842 | cLEN10C18 | Red ripe fruit | RFLP | 1-G |
GLD | l-Galactono-γ-lactone dehydrogenase | TC112703 | cLHT24N6 | S. habrochaites | RFLP** | 10-E |
TC103695 | cTOC18F20 | Trichome/flower | ||||
AO | Ascorbate oxidase | TC99795 | cLEC67D22 | Tomato callus | RFLP** | 4-E |
MDHAR1 | Monodehydroascorbate reductase | EST263177 TC singleton SGN-U155072 | cLES18B10 | Tomato leaf | PCR* | 2-J |
MDHAR2 | Monodehydroascorbate reductase | TC126092 | cTOD20A21 | Tomato flower, anthesis | PCR* | 8-G |
MDHAR3 | Monodehydroascorbate reductase | TC124435 | cTOC25K2 | Tomato flower, 8 mm, preanthesis buds | PCR* | 9-D |
DHAR1 | Dehydroascorbate reductase | TC116433 | cLEI16N22 | Tomato germinating seed | RFLP | 5-H |
DHAR2 | Dehydroascorbate reductase | TC117375 | cLEG59I24 | Tomato breaker fruit | PCR* | 11-D |
APX | Ascorbate peroxidase (putative peroxisomal) | TC161616 | cTOE3O17 | Tomato crown gall | PCR* | 2-I |
VTC2 | Unknown protein | TC153912 | cTOD24H13 | Tomato flower, anthesis | PCR* | 6-D |
PGI | Phosphoglucose isomerase | TC98796 | cLEB8K2 | Tomato shoot | RFLP | 12-D |