Table 2.
GC3 of fugu paralog subcluster protocadherin sequences
Paralog subclusters | GC3 (%) | ||
5' low homology regiona | 3' high homology regiona | p Valueb | |
FrPcdh2α2–7 | 41.3 ± 7.2 | 61.2 ± 0.3 | 2.78 × 10-4 |
FrPcdh2α9–25 | 38.4 ± 4.3 | 54.4 ± 0.5 | 2.68 × 10-16 |
FrPcdh2α26–36 | 45.0 ± 2.2 | 60.7 ± 0.7 | 1.32 × 10-15 |
FrPcdh2γ1–17 | 43.6 ± 2.6 | 56.3 ± 0.4 | 2.40 × 10-19 |
FrPcdh2γ19–32' | 41.5 ± 3.4 | 58.5 ± 0.6 | 3.28 × 10-15 |
FrPcdh2γ33'-36' | 40.1 ± 1.2 | 68.8 ± 0.3 | 6.35 × 10-9 |
a GC3 is calculated as the average percentage of the GC content at the codon third-position in each paralog subcluster and expressed as mean ± standard deviation.
b The statistical analysis was conducted using Student's t-test.