Table 1.
Microarray detection frequencies for various cytokines in human kidney samples.
| Probe Set ID | Gene Name | Total samplesa | %P ALL | %P Normal (n = 15) | %P Transplant (n = 36) | %P Cancer (n = 30) | |
| 1 | 224211_at | Forkhead box P3 (FoxP3) | 60 | 0% | 0% | 0% | |
| 2 | 221333_at | Forkhead box P3 (FoxP3) | 81 | 0% | 0% | 0% | 0% |
| 3 | 221334_s_at | Forkhead box P3 (FoxP3) | 81 | 7% | 0% | 0% | 20% |
| 4 | 202727_s_at | Interferon gamma receptor 1 (IFNγ-R1) | 81 | 100% | 100% | 100% | 100% |
| 5 | 242903_at | Interferon gamma receptor 1 (IFNγ-R1) | 60 | 100% | 100% | 100% | |
| 6 | 211676_s_at | Interferon gamma receptor 1 (IFNγ-R1) | 81 | 99% | 100% | 97% | 100% |
| 7 | 201642_at | Interferon gamma receptor 2 | 81 | 91% | 80% | 89% | 100% |
| 8 | 210354_at | Interferon, gamma (IFNγ) | 81 | 10% | 0% | 3% | 23% |
| 9 | 208200_at | Interleukin 1, alpha | 81 | 63% | 33% | 53% | 90% |
| 10 | 210118_s_at | Interleukin 1, alpha | 81 | 1% | 0% | 0% | 3% |
| 11 | 39402_at | Interleukin 1, beta | 81 | 38% | 33% | 47% | 30% |
| 12 | 205067_at | Interleukin 1, beta | 81 | 6% | 20% | 3% | 3% |
| 13 | 207849_at | Interleukin 2 | 81 | 4% | 7% | 6% | 0% |
| 14 | 207906_at | Interleukin 3 | 81 | 0% | 0% | 0% | 0% |
| 15 | 207539_s_at | Interleukin 4 | 81 | 0% | 0% | 0% | 0% |
| 16 | 207538_at | Interleukin 4 | 81 | 0% | 0% | 0% | 0% |
| 17 | 207952_at | Interleukin 5 | 81 | 0% | 0% | 0% | 0% |
| 18 | 205207_at | Interleukin 6 (IL-6) | 81 | 60% | 73% | 64% | 50% |
| 19 | 206693_at | Interleukin 7 | 81 | 64% | 40% | 64% | 77% |
| 20 | 241808_at | Interleukin 7 | 60 | 72% | 42% | 100% | |
| 21 | 202859_x_at | Interleukin 8 | 81 | 65% | 53% | 50% | 90% |
| 22 | 211506_s_at | Interleukin 8 | 81 | 14% | 20% | 0% | 27% |
| 23 | 208193_at | Interleukin 9 | 81 | 1% | 0% | 0% | 3% |
| 24 | 207433_at | Interleukin 10 (IL-10) | 81 | 4% | 7% | 0% | 7% |
| 25 | 206924_at | Interleukin 11 | 81 | 0% | 0% | 0% | 0% |
| 26 | 206926_s_at | Interleukin 11 | 81 | 0% | 0% | 0% | 0% |
| 27 | 207844_at | Interleukin 13 | 81 | 0% | 0% | 0% | 0% |
| 28 | 203085_s_at | Transforming growth factor, beta 1 (TGF-β1) | 81 | 49% | 67% | 0% | 100% |
| 29 | 203084_at | Transforming growth factor, beta 1 (TGF-β1) | 81 | 1% | 0% | 0% | 3% |
| 30 | 207113_s_at | Tumor necrosis factor, alpha (TNF-α) | 81 | 9% | 0% | 0% | 23% |
a For each probeset the total number of samples was either 60 or 81. The U133A does not contain all of the probesets from the U133Plus2.0. U133A data was used for 15 "Normal" and 6 "Transplant" samples.