Table 6.
Proteins that are specific to certain subgroups of methanogens
| (a) Proteins specific to Methanococcales, Methanobacteriales, Methanopyrales and Methanomicrobiales | ||||||||
| MMP0125 | [NP_987245] | COG4018 | MMP1451 | [NP_988571] EhaD | COG4039 | |||
| MMP0935 | [NP_988055] | CDD26896 | MMP1452 | [NP_988572] EhaE | COG4038 | |||
| MMP1243 | [NP_988363] | CDD30112 | MMP1453 | [NP_988573] EhaF | COG4037 | |||
| MMP1449 | [NP_988569] EhaB | COG4041 | MMP1454 | [NP_988574] EhaG | COG4036 | |||
| MMP1450 | [NP_988570] EhaC | COG4040 | MMP1498 | [NP_988618] | CDD26800 | |||
| (b) Proteins specific to Methanococcales, Methanobacteriales and Methanopyrales | ||||||||
| MMP0127 | [NP_987247] Hmd | CDD8560 | MMP1459 | [NP_988579] EhaL | COG4035 | |||
| MMP0267 | [NP_987387] | COG4053 | MMP1497 | [NP_988617] | COG4019 | |||
| MMP0618 | [NP_987738] | COG4075 | MMP1598 | [NP_988718] | CDD15766 | |||
| MMP1217 | [NP_988337] | COG4024 | MMP1664 | [NP_988784] | COG4071 | |||
| MMP1448 | [NP_988568] EhaA | COG4042 | MMP1716 | [NP_988836] HmdII | CDD8560 | |||
| (c) Proteins specific to Methanobacteriales and Methanopyrales | ||||||||
| MK0046 | [NP_613333] | MK0502 | [NP_613787] | MK0927 | [NP_614210] | |||
| MK0108 | [NP_613395] | MK0749 | [NP_614033] | MK1599 | [NP_614882] = MK0927 | |||
| MK0147 | [NP_613434] | MK0750 | [NP_614034] | MK1282 | [NP_614565] = MK0502 | |||
| MK0241 | [NP_613528] | MK0751 | [NP_614035] | MK1513 | [NP_614796] | |||
| MK0431 | [NP_613716] | MK0854 | [NP_614137] | COG0707 | MK1541 | [NP_614824] | ||
| (d) Proteins specific to Methanosarcinales | ||||||||
| Mbur_0178 | [YP_564939] | Mbur_1314 | [YP_565982] | Mbur_1890 | [YP_566523] | |||
| Mbur_0218 | [YP_564978] | Mbur_1506 | [YP_566163] | Mbur_1953 | [YP_566584] | |||
| Mbur_0544 | [YP_565271] | Mbur_1512 | [YP_566169] | COG4742 | Mbur_1956 | [YP_566587] | ||
| Mbur_0997 | [YP_565686] | Mbur_1689 | [YP_566333] | Mbur_2254 | [YP_566865] | |||
| Mbur_1283 | [YP_565952] | Mbur_1863 | [YP_566496] | |||||
| (e) Proteins only found in Methanococcales and Methanobacteriales | ||||||||
| MMP0124 | [NP_987244] | MMP1073 | [NP_988193] | COG1320 | MMP1460 | [NP_988580] EhaM | ||
| MMP0223 | [NP_987343] | MMP1110 | [NP_988230] | CDD2427 | MMP1633 | [NP_988753] | ||
| MMP0940 | [NP_988060] | |||||||
| (f) Proteins only found in Methanococcales and Methanopyrales | ||||||||
| MMP1065 | [NP_988185] | MMP1467 | [NP_988587] EhaT | MMP1568 | [NP_988688] | COG4010 | ||
| MMP1118 | [NP_988238] | CDD28974 | ||||||
| (g) Proteins only found in Methanosarcinales and Methanomicrobiales | ||||||||
| Mbur_0145 | [YP_564912] | Mbur_1977 | [YP_566606] | Mbur_2094 | [YP_566718] | |||
| Mbur_1266 | [YP_565937] | Mbur_2017 | [YP_566644] | Mbur_2402 | [YP_567003] | |||
| Mbur_1788 | [YP_566426] | |||||||
The protein ID number starting with MK represents query protein from the genome of M. kandleri AV19.