Table 7.
Proteins restricted to several archaeal lineages
| (a) Proteins only found in Thermococci, Archaeoglobus and methanogens | |||||
| PAB0076 | [NP_125818] | CDD15620 | PAB1291 | [NP_127284] | CDD41906 |
| PAB0138 | [NP_125896] | CDD9576 | PAB1584 | [NP_126876] | COG4072 |
| PAB0965 | [NP_127127] | CDD15705 | PAB1860 | [NP_126440] | |
| PAB19271 | [NP_126347] | CDD29323 | PAB0813 | [NP_126902] | COG1630 |
| PAB1994 | [NP_126245] | CDD9568 | PAB0853 | [NP_126970] | |
| PAB0036 | [NP_125764] | PAB1251 | [NP_127332] | endonuclease COG3780 | |
| PAB0054 | [NP_125787] | CDD41919 | PAB1779 | [NP_126559] | CDD43950 |
| PAB0176 | [NP_125948] | CDD43579 | PAB18062 | [NP_126515] | CDD43599 |
| PAB1127 | [NP_127394] | CDD30177 | PAB2413 | [NP_126288] | COG1710 |
| (b) Proteins unique to Thermococci + Archaeoglobus | |||||
| PAB0981 | [NP_127155] | PAB1672 | [NP_126731] | ||
| PAB0982 | [NP_127156] | PAB3017 | [NP_125737] | ||
| PAB0985 | [NP_127159] | PAB7298 | [NP_126858] | ||
| (c) Proteins mainly shared by Halobacteria and some methanogens | |||||
| VNG0240C3 | [AAG18840] | COG4031 | VNG2315H | [AAG20425] | MC1 CDD45747 |
| VNG1236C | [AAG19598] | VNG2508C | [AAG20570] | Cyo COG4083 | |
| VNG1611C | [AAG19875] | COG4749 | VNG2524H | [AAG20585] | |
| VNG1670C | [AAG19921] | COG3612 | VNG2669G | [AAG20696] | |
| VNG1891H | [AAG20086] | ||||
| (d) Proteins mainly shared by Thermoplasmata and Sulfolobus | |||||
| Ta0035 | [NP_393514] | COG5592 | Ta1440 | [NP_394894] | |
| Ta0164 | [NP_393642] | Ta1453 | [NP_394906] | ||
| Ta0165 | [NP_393643] | Ta1507 | [NP_394957] | CDD29645 | |
| Ta0267 | [NP_393747] | CDD43623 | Saci_0040 | [YP_254763] | |
| Ta0308 | [NP_393788] | Saci_0054 | [YP_254777] | ||
| Ta0347 | [NP_393826] | TauA CDD31059 | Saci_0055 | [YP_254778] | |
| Ta0547 | [NP_394021] | Saci_0322 | [YP_255031] | ||
| Ta0548m4 | [NP_394022] | Saci_0323 | [YP_255032] | ||
| Ta0583 | [NP_394007] | Saci_0979 | [YP_255633] | SdhD | |
| Ta0759 | [NP_394223] | Saci_1065 | [YP_255715] | ||
| Ta0793a | [NP_394256] | Saci_1491 | [YP_256105] | CDD40171 | |
| Ta0938 | [NP_394396] | Saci_1560 | [YP_256166] | ||
| Ta0939 | [NP_394397] | PQQC CDD45213 | Saci_1747 | [YP_256346] | SoxE CDD46414 |
| Ta1156 | [NP_394612] | Saci_1952 | [YP_256548] | ||
| Ta1345 | [NP_394801] | Saci_2078 | [YP_256665] | ||
Note 1. A homolog to PAB1927 is also found in Rubrobacter xylanophilus DSM 9941;
Note 2. A homolog to PAB1806 is also found in Aquifex aeolicus VF5;
Note 3. A homolog to VNG0240c is also found in Methanopyrus kandleri;
Note 4. Two low-scoring homologs for Ta0548 are also found in Gloeobacter violaceus PCC 7421.