Table 4.

E. coli MG1655 gene expression ratios compared to homologous gene expression ratios of S. Typhimurium [51].

E. coli MOPS LSMMG up-regulated			homologous Salmonella genes
gene	b#	ratio	gene	STM ID#	ratio
flgB	b1073	2.08	flgB	STM1174	<2
flgD	b1075	1.96	flgD	STM1176	<2
flgE	b1076	2.40	flgE	STM1177	<2
ydfD	b1576	2.64	not present
fliZ	b1921	2.22	fliZ	STM1955	<2
dctR	b3507	2.58	not present
hdeB	b3509	6.25	slyA	STM1444	<2
hdeA	b3510	4.41	slyA	STM1444	<2
hdeD	b3511	3.51	not present
gadE	b3512	2.56	not present
E. coli MOPS LSMMG down-regulated			homologous Salmonella genes
gene	b#	ratio	gene	STM ID#	ratio
copA	b0484	-2.37	copA	STM0498	<2
ybcH	b0567	-3.25	not present
cusC	b0572	-2.74	STM0350	STM0350	<2
cusF	b0573	-4.13	not present
cusA	b0575	-3.33	STM0350	STM0350	<2
uspG	b0607	-2.58	ybdQ	STM0614	<2
yfiA	b2597	-2.84	yfia	STM2665	<2
accB	b3255	-2.67	accB	STM3379	<2
cpxP	b3913	-2.85	cpxP	STM4060	<2
E. coli LB LSMMG up-regulated			homologous Salmonella genes
gene	b#	ratio	gene	STM ID#	ratio
accA	b0185	1.97	accA	STM0232	<2
E. coli LB LSMMG down-regulated			homologous Salmonella genes
gene	b#	ratio	gene	STM ID#	ratio
sucD	b0729	-1.77	sucD	STM0739	-3.33
rimM	b2608	-2.07	rimM	STM2675	<2
rpsP	b2609	-2.48	rpsP	STM2676	<2
rplA	b3984	-2.03	rplA	STM4150	<2
rplJ	b3985	-2.49	rplJ	STM4151	<2
rpsF	b4200	-2.23	rpsF	STM4391	<2
rpsR	b4202	-2.41	rpsR	STM4393	<2
rplI	b4203	-2.06	rplI	STM4394	<2