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. 2007 Feb 9;92(9):3010–3021. doi: 10.1529/biophysj.106.094243

FIGURE 4.

FIGURE 4

Force traces for P5ab hairpin with 3.2 Kbp handles in PM from the simulations for two different trap stiffnesses ɛb ≈ 0.1 pN/nm (upper panel) and ɛb ≈ 0.035 pN/nm (lower panel). The bandwidth used is 1 KHz. We show the mean forces, fF and fU, in the upper and lower parts of the square-like-sign force traces, corresponding to the forces at the folded and unfolded states, respectively. Note that the value of such forces, fF and fU, is higher than the ones measured in experiments (1) by ∼1–1.5 pN. This discrepancy is consistent with the fact that the free energy parameters for P5ab used in simulations (3234) corresponds to higher salt concentrations than the experimental ones.