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. 2007 Feb 19;8(2):R21. doi: 10.1186/gb-2007-8-2-r21

Table 3.

Intron fragments

n Variable Mean P
150 Nucleotides at 5' end versus central part of all introns
 5' end 36,384 Ki 0.938
 Central 36,289 Ki 1.144 < 0.001
 5' end 36,384 GC 0.441
 Central 36,289 GC 0.432 < 0.001

150 Nucleotides at 3' end versus remainder of all introns
 3' end 36,456 Ki 0.924
 Central 36,289 Ki 1.144 < 0.001
 3' end 36,456 GC 0.410
 Central 36,289 GC 0.432 < 0.001

1000 Nucleotides at 5' end versus central part of first introns
 5' end 3,295 Ki 1.096
 Central 3,306 Ki 1.195 < 0.001
 5' end 3,295 GC 0.499
 Central 3,306 GC 0.435 < 0.001

150 Nucleotides at 5' end of all introns
 Short 14,892 Ki 0.942
 Long 21,492 Ki 0.935 0.371 (NS)
 Short 14,892 GC 0.459
 Long 21,492 GC 0.429 < 0.001

150 Nucleotides at 3' end of all introns
 Short 14,929 Ki 0.924
 Long 21,527 Ki 0.924 0.991 (NS)
 Short 14,929 GC 0.441
 Long 21,527 GC 0.389 < 0.001

5' 1000 Nucleotides of first introns
 Short 150 Ki 1.193
 Long 3,145 Ki 1.092 0.011
 Short 150 GC 0.549
 Long 3,145 GC 0.499 0.234 (NS)

Central part after removing the 150 nucleotides at 5' and 3' end of all introns
 Short 14,014 Ki 1.078
 Long 22,275 Ki 1.185 < 0.001
 Short 14,014 GC 0.451
 Long 22,275 GC 0.420 < 0.001

Central part after removing the 1000 nucleotides at 5' end of first introns
 Short 140 Ki 1.172
 Long 3,166 Ki 1.196 0.570 (NS)
 Short 140 GC 0.457
 Long 3,166 GC 0.434 < 0.001

Central part of first introns versus central part of other introns
 First 3,306 Ki 1.195
 Others 32,012 Ki 1.140 < 0.001
 First 3,306 GC 0.435
 Others 32,012 GC 0.429 < 0.001

Shown are the average Ki and GC for different fragments of introns. NS, not significant.