Table 3.
Frequency of Gene Occurrences in the 1000 Classifiers for the Latulippe et al. Prostate Study.
| Probe Set | Gene Symbol | Gene Title | Count* | Z Score |
| 37407_s_at | MYH11 | Myosin, heavy polypeptide 11, smooth muscle | 112 | 147.59 |
| 32582_at | MYH11 | Myosin, heavy polypeptide 11, smooth muscle | 101 | 133.02 |
| 767_at | MYH11 | Myosin, heavy polypeptide 11, smooth muscle | 96 | 126.40 |
| 1197_at | ACTG2 | Actin, gamma 2, smooth muscle, enteric | 93 | 122.42 |
| 36931_at | TAGLN | Transgelin | 77 | 101.23 |
| 32755_at | ACTA2 | Actin, alpha 2, smooth muscle, aorta | 65 | 85.34 |
| 37576_at | PCP4 | Purkinje cell protein 4 | 62 | 81.36 |
| 774_g_at | MYH11 | Myosin, heavy polypeptide 11, smooth muscle | 61 | 80.04 |
| 34203_at | CNN1 | Calponin 1, basic, smooth muscle | 31 | 40.30 |
| 36834_at | MOXD1 | Monooxygenase, DBH-like 1 | 28 | 36.33 |
| 39333_at | COL4A1 | Collagen, type IV, alpha 1 | 27 | 35.01 |
| 773_at | MYH11 | Myosin, heavy polypeptide 11, smooth muscle | 24 | 31.03 |
| 38834_at | TOPBP1 | Topoisomerase (DNA) II binding protein 1 | 23 | 29.71 |
| 685_f_at | LOC112714 | Similar to alpha tubulin | 23 | 29.71 |
| 34878_at | SMC4L1 | SMC4 structural maintenance of chromosomes 4-like 1 | 22 | 28.38 |
| 35970_g_at | MPHOSPH9 | M-phase phosphoprotein 9 | 22 | 28.38 |
| 41137_at | PPP1R12B | Protein phosphatase 1, regulatory (inhibitor) subunit 12B | 21 | 27.06 |
| 1884_s_at | PCNA | Proliferating cell nuclear antigen | 20 | 25.73 |
| 40407_at | KPNA2 | Karyopherin alpha 2 (RAG cohort 1, importin alpha 1) | 20 | 25.73 |
| 32662_at | MDC1 | Mediator of DNA damage checkpoint 1 | 19 | 24.41 |
| 34376_at | PKIG | Protein kinase (cAMP-dependent, catalytic) inhibitor gamma | 19 | 24.41 |
| 35742_at | C16orf45 | Chromosome 16 open reading frame 45 | 19 | 24.41 |
| 36987_at | LMNB2 | Lamin B2 | 19 | 24.41 |
| 39145_at | MYL9 | Myosin, light polypeptide 9, regulatory | 18 | 23.09 |
| 38430_at | FABP4 | Fatty acid binding protein 4, adipocyte | 17 | 21.76 |
| 1599_at | CDKN3 | Cyclin-dependent kinase inhibitor 3 | 16 | 20.44 |
| 2012_s_at | PRKDC | Protein kinase, DNA-activated, catalytic polypeptide | 16 | 20.44 |
| 32305_at | COL1A2 | Collagen, type I, alpha 2 | 16 | 20.44 |
| 418_at | MKI67 | Antigen identified by monoclonal antibody Ki-67 | 16 | 20.44 |
| 651_at | RPA3 | Replication protein A3, 14kDa | 16 | 20.44 |
| 35474_s_at | COL1A1 | Collagen, type I, alpha 1 | 15 | 19.11 |
| 37749_at | MEST | Mesoderm specific transcript homolog (mouse) | 15 | 19.11 |
| 38031_at | DDX48 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 48 | 15 | 19.11 |
| 39990_at | ISL1 | ISL1 transcription factor, LIM/homeodomain (islet-1) | 15 | 19.11 |
| 1505_at | TYMS | Thymidylate synthetase | 14 | 17.79 |
| 33924_at | RAB6IP1 | RAB6 interacting protein 1 | 14 | 17.79 |
| 35694_at | MAP4K4 | Mitogen-activated protein kinase kinase kinase kinase 4 | 14 | 17.79 |
| 32306_g_at | COL1A2 | Collagen, type I, alpha 2 | 13 | 16.46 |
| 32847_at | MYLK | Myosin, light polypeptide kinase | 13 | 16.46 |
| 37305_at | EZH2 | Enhancer of zeste homolog 2 (Drosophila) | 13 | 16.46 |
| 41081_at | BUB1 | BUB1 budding uninhibited by benzimidazoles 1 homolog | 13 | 16.46 |
| 32272_at | K-ALPHA-1 | Tubulin, alpha, ubiquitous | 12 | 15.14 |
| 36627_at | SPARCL1 | SPARC-like 1 (mast9, hevin) | 12 | 15.14 |
| 37347_at | CKS1B | CDC28 protein kinase regulatory subunit 1B | 12 | 15.14 |
| 39519_at | KIAA0692 | KIAA0692 protein | 12 | 15.14 |
| 40845_at | ILF3 | Interleukin enhancer binding factor 3, 90 kDa | 12 | 15.14 |
*
Count is the number of occurrences of each gene in 1000 rules.