TABLE 3.

Spearman's correlations between power and genotypic characteristics

	Correlation with power
Marker SNPs	Average R2	Average D′	Difference between causal and marker frequencies	Haplotype no.	Haplotype diversity	Window size
2	0.483	0.301	−0.693	−0.541	−0.322	−0.239
3	0.556	0.418	−0.602	−0.661	−0.445	−0.260
4	0.614	0.515	−0.548	−0.741	−0.529	−0.277
5	0.643	0.572	−0.511	−0.785	−0.578	−0.287
6	0.665	0.615	−0.484	−0.817	−0.616	−0.299
7	0.680	0.644	−0.463	−0.840	−0.644	−0.304

Assumes PVE = 0.10. P < 10⁻¹⁵ for all tests.