TABLE 1.
Definitions of parameters used in this study
Parameter | Description |
---|---|
K | No. of populations |
L | No. of loci |
Jl | No. of unique alleles observed at locus l |
n | No. of individuals sampled |
xilj | No. of copies of allele j at locus l in individual i |
xil | No. of copies of alleles at locus l for individual i![]() |
xil | Allele information for individual i at locus l |
Xi | Allele information for individual i |
X | Allele information for all individuals |
yklj | No. of copies of allele j at locus l in individuals assigned to population k |
![]() |
No. of copies of allele j at locus l in individuals assigned to population k, excluding information for individual i |
ykl | No. of alleles observed for some locus l in individuals assigned to population k![]() |
![]() |
No. of alleles observed for some locus l in individuals assigned to population k, excluding information for individual i |
pklj | Frequency of allele j at locus l in population k |
pkl | Vector containing the allele frequencies for locus l in population k |
λj | Dirichlet parameter for frequency of allele j |
λ0 | Sum of the Dirichlet parameters for some locus and population ![]() |
zi | Assignment of individual i to a population [zi ∈ (1, …, K)] |
z | Allocation vector containing the assignments of the n individuals to populations [i.e., z = (z1, z2, …, zn)] |
α | Parameter of the Dirichlet process prior model that controls the “clumpiness” of the process |
S(n, k) | Stirling no. of the second kind (no. of ways to partition n individuals into k populations) |
Bn | Bell nos. (total no. of ways to assign n individuals to populations) |
nak | Stirling nos. of the first kind |
Γ(·) | Gamma function |
I(·) | Indicator function, equaling 0 or 1 |