TABLE 2.
Properties of isolates obtained in this study
Strain | Inoculum for enrichment and substrate | DMS oxidation | Phylogenetic group | Closest cultured relative | % Identity |
---|---|---|---|---|---|
DMS001 | Emiliania huxleyi (pooled) 50-250 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 98 |
DMS002 | Emiliania huxleyi (pooled) 50-250 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS003 | Emiliania huxleyi (pooled) 50-250 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 98 |
DMS004 | Emiliania huxleyi (pooled) 50-250 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS006 | Emiliania huxleyi (pooled) 50-250 μM DMS | − | Alphaproteobacteria | Sphingopyxis flavimaris | 99 |
DMS007 | Emiliania huxleyi (pooled) 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 98 |
DMS009 | Emiliania huxleyi (pooled) 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS010 | Emiliania huxleyi (pooled) 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS011 | Emiliania huxleyi (pooled) 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 98 |
DMS012 | Emiliania huxleyi (pooled) 50 μM DMS | − | Alphaproteobacteria | Stappia stellulata | 99 |
DMS021 | Coral Beach rock pool 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 98 |
DMS025 | English Channel, L4 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 98 |
DMS026 | English Channel, L4 50 μM DMS | − | Alphaproteobacteria | Ruegeria algicola | 97 |
DMS028 | English Channel, L4 50 μM DMS | − | Actinobacteria | Microbacterium schleiferi | 99 |
MeOH030 | Emiliania. huxleyi (pool) 5 mM methanol | − | Alphaproteobacteria | Sphingopyxis flavimaris | 99 |
DMS039 | Achmelvich Bay 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS040 | Achmelvich Bay 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS043 | Achmelvich Bay 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS044 | Achmelvich Bay 50 μM DMS | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS048 | Rock pool 50 μM DMS (formate preenriched) | + | Gammaproteobacteria | Methylophaga thalassica | 97 |
DMS049 | English Channel (May 2005), L4 50 μM DMS | + | Gammaproteobacteria | Glaciecola mesophila | 99 |
DMS050 | English Channel (May 2005), L4 50 μM DMS | + | Gammaproteobacteria | Marinobacter sp. strain Splume3.1825c | 99 |
DMS052 | English Channel (May 2005), L4 50 μM DMS | − | Actinobacteria | Streptomyces sodiiphilus | 97 |
DMS054 | English Channel (May 2005), L4 50 μM DMS | + | Gammaproteobacteria | Marinobacter sp. strain Splume3.1825c | 99 |