TABLE 2.
Primers and TaqMan probes for species-specific real-time PCR
| Dinoflagellate | Primer or probe | Sequence (5′→3′) | Reference |
|---|---|---|---|
| Cryptoperidiniopsis brodyi | Forward primer CBITSF | TTGACACGTTGAAGTGAWGGA | This study |
| Reverse primer CBITSR | ACAGCCAATGAAAGAGTKATGACAA | ||
| Probe CBITSP | FAM-CATCTCATCGCTCGCCGTCGAT-TAMRA | ||
| Pfiesteria piscicida | Forward primer 107 | CAGTTAGATTGTCTTTGGTGGTCAA | 3 |
| Reverse primer 320 | TGATAGGTCAGAAAGTGATATGGTA | ||
| Probe | FAM-CATGCACCAAAGCCCGACTTCTCG-TAMRA | ||
| Pfiesteria shumwayae | Forward primer PSMTF2 | TGACTTTCTAACTTCTAACTTCTTTACATC | 42 |
| Reverse primer PSCOBR1 | AACACCATCCATAGAATATTTCTCTCATG |