TABLE 2.
Putative genes identified on the genomic fragment pAPKS18 (A. aerophoba)
| CDS | Putative function | Most similar homolog (protein, accession no., and origin) | Similarity/identity (%) | No. of aab |
|---|---|---|---|---|
| ORF1 | Peptidase S15 | NOC_2221 (YP_344211), Nitrosococcusoceani ATCC 19707 | 65/51 | 675 |
| ORF2 | Agmatinase | RNGR00257 (AAQ87384), Rhizobium sp. strain NGR234 | 57/41 | 321 |
| ORF3 | Putative methyltransferase | RoseDRAFT_3522 (AAFG02000001), Silicibacter sp. strain TM1040 | 53/39 | 162 |
| ORF4 | TetR-type regulator | ArthDRAFT_2587 (AAHG01000004), Arthrobacter sp. strain FB24 | 45/28 | 195 |
| ORF5 | Cytochrome c family | RB8450 (CAD78645), Rhodopirellula baltica SH 1 | 54/37 | 679 |
| ORF6 | FADa-dependent oxidoreductase | BB2693 (BX640445), Bordetellabronchiseptica | 60/45 | 429 |
| ORF7 | Sulfatase | BambDRAFT_1967 (ZP_00689010), Burkholderiaambifaria AMMD | 62/50 | 503 |
| ORF8 | Conserved hypothetical protein | RxylDRAFT_3044 (ZP_00599827), Rubrobacter xylanophilus DSM 9941 | 62/51 | 310 |
| ORF9 | γ-Glutamyl transferase | BradDRAFT_6380 (ZP_00857491), Bradyrhizobium sp. strain BTAi1 | 68/55 | 598 |
| ORF10 | d-3-Phosphoglycerate dehydrogenase | RNGR00097 (AY316746), Rhizobium sp. strain NGR234 | 73/65 | 346 |
| ORF11 | Erythritol kinase | BradDRAFT_0972 (ZP_00863500), Bradyrhizobium sp. strain BTAi1 | 67/54 | 527 |
| ORF12 | Epimerase | BcenDRAFT_5477 (AAHI01000003), Burkholderiacenocepacia AU 1054 | 48/34 | 446 |
| SupB | ACP | AcpP (BA000028), Oceanobacillusiheyensis | 47/29 | 76 |
| SupC | Phosphopantetheinyl transferase | PT_SA1 (AAY00023), Discodermiadissoluta symbiont | 68/54 | 250 |
| SupE | Permease | CP000124 (YP_332786), Burkholderiapseudomallei 1710b | 46/27 | 597 |
| SupA | PKS (KS AT DH MT ER KR ACP KS [AT]) | SA1_PKSB (AAY00026), Discodermia dissoluta symbiont | 64/50 | 3,403 |
| SupD | Hydrolase | PoxA (AAT09607), Pseudomonas aeruginosa PAO1 | 41/28 | 326 |
| ORF18 | Aminotransferase | PA0299 (NP_248990), Pseudomonas aeruginosa PAO1 | 70/55 | 444 |
| ORF19 | Membrane protein | Magn03009209 (ZP_00054563), Magnetospirillum magnetotacticum MS-1 | 68/52 | 517 |
| ORF20 | Permease | Rsph17025DRAFT_3795 (ZP_00914910), Rhodobactersphaeroides ATCC 17025 | 74/54 | 275 |
| ORF21 | Permease | Rrub02002558 (ZP_00269018), Rhodospirillumrubrum | 72/56 | 298 |
a
FAD, flavin adenine dinucleotide.
b
aa, amino acids.