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. 2007 Feb 9;73(7):2369–2372. doi: 10.1128/AEM.00141-07

TABLE 2.

Characterization of O157:H7 isolates from the Ganges River, Varanasi

Isolate Sampling site Resulta of:
PCR for stx1 PCR for stx2 PCR for eae Sorbitol fermentation test
Referenceb NAc + + +
No. 1 Nagwa Nala + + + +
No. 2 Nagwa Nala +
No. 3 Tulsi Ghat + + + +
No. 4 Varuna River + + + +
a

Profiles for O157:H7 strains were determined using PCR analysis with an array of virulence gene primers. +, positive; −, negative; stx1, Shiga toxin 1 gene; stx2, Shiga toxin 2 gene; eae, enterocyte attachment and effacement (intimin) gene. The ability to ferment sorbitol was tested using API 20E and BBL crystal enteric/nonfermenter identification kits.

b

The O157:H7 reference strain is from the E. coli Reference Center, Penn State University (identification no. 3A-3299-85).

c

NA, not applicable.