TABLE 1.
General features of the H. somnus 129Pt, H. ducreyi 35000HP, and H. influenzae Rd genomes
Parameter | Value for organism
|
||
---|---|---|---|
H. somnus 129Pt | H. ducreyi 35000HP | H. influenzae Rda | |
Size (Mb) | 2.0 | 1.7 | 1.8 |
Plasmid | pHS129 (5.2 kb) | None | None |
Coding sequence (Mb) | 1.8 | 1.5 | 1.6 |
Coding sequence (%) | 89.5 | 86.6 | 89 |
GC% | 37 | 38 | 38 |
Average ORF size (bp) | 980 | 828 | 915 |
Total no. of CDSs | 1,844 | 1,781 | 1,743 |
No. of CDSs with assigned function | 1,313 | 1,092 | 1,007 |
No. of conserved hypothetical CDSs | 440 | 495 | 347 |
No. of hypothetical CDSs | 61 | 130 | 389 |
No. of tRNAs | 50 | 45 | 54 |
No. of rRNA operons | 5 | 6 | 6 |
No. of possible pseudogenes | 15b | 19b | 62c |