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. 2006 Dec 15;189(5):1890–1898. doi: 10.1128/JB.01422-06

TABLE 1.

General features of the H. somnus 129Pt, H. ducreyi 35000HP, and H. influenzae Rd genomes

Parameter Value for organism
H. somnus 129Pt H. ducreyi 35000HP H. influenzae Rda
Size (Mb) 2.0 1.7 1.8
Plasmid pHS129 (5.2 kb) None None
Coding sequence (Mb) 1.8 1.5 1.6
Coding sequence (%) 89.5 86.6 89
GC% 37 38 38
Average ORF size (bp) 980 828 915
Total no. of CDSs 1,844 1,781 1,743
No. of CDSs with assigned function 1,313 1,092 1,007
No. of conserved hypothetical CDSs 440 495 347
No. of hypothetical CDSs 61 130 389
No. of tRNAs 50 45 54
No. of rRNA operons 5 6 6
No. of possible pseudogenes 15b 19b 62c
a

Data for H. influenzae Rd were obtained from reference 21.

b

Number of genes annotated as fragments and N-terminal, C-terminal, and central regions.

c

Data were obtained from reference 65 and indicate the number of genes containing frameshifts and early stop codons.