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. 2007 Feb 2;189(7):2793–2804. doi: 10.1128/JB.00952-06

TABLE 1.

Oligonucleotide primers used for PCR and RT-PCRs

Primer no. Primer namea Sequence (5′-3′)b Reference
1 aap 1 F TAC ATG GGA GGT ATA ATA TGG This paper
2 aap 2 R CCA AAT ATG AAC AAT GAT CCG This paper
3 rAAP1357-1756 F ATA CAA CTG GTG CAG ATG GTT G 53
4 rAAP1357-1756 R GTA GCC GTC CAA GTT TTA CCA G 53
5 aap rev 2 TGG TTC TGC TTT TGT TGG ACC ATA C 47
6 rAAP53-608 F CCG GGATCC GCA GAA GAA AAA CAA GTT GAT C 44
7 rAAP53-608 R CGG AAGCTT TTA TGC TTT AGG AGT GTA TGT CAA TG 44
8 aap repeat_end GGA CCA TAT TTT STC ACA TC This paper
9 aap repeat 1_BamHI CCG GGATCC GTC GAT GGA GAT CCA ATT ATA TC This paper
10 aap repeats_end_HindIII CGG AAGCTT GGA CCA TAT TTT STC ACA TC This paper
11 aap US 1 F AGC ACA AGC AGA AGA TGG This paper
12 icaR F TTA TCA ATG CCG CAG TTG TC 1
13 icaR R GTT TAA CGC GAG TGC GCT AT 1
14 icaA F TAA TCC CGA ATT TTT GTG AA 1
15 icaA R AAC GCA ATA ACC TTA TTT TCC 1
16 icaD F ACA GTC GCT ACG AAA AGA AA 1
17 icaD R GGA AAT GCC ATA ATG ACA AC 1
18 icaB F ATG GTC AAG CCC AGA CAG AG 1
19 icaB R CGT GTT TTC AAC ATT TAA TGC AA 1
20 icaC F CTG ATC AAG AAT TTA AAT CAC AAA 1
21 icaC R AAA GTC CCA TAA GCC TGT TT 1
22 icaAB-F TAA CTT TAG GCG CAT ATG TTT T 10
23 icaAB-R TTC CAG TTA GGC TGG TAT TG 10
a

F, forward primer; R, reverse primer.

b

Underlining indicates restriction sites.