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. 2006 Jun;55(6):863–868. doi: 10.1136/gut.2005.080937

Table 1 Polymerase chain reaction (PCR) primers used in the study.

SNP PCR primer sequences Annealing temp (°C)
Primers used for allele specific PCR
CTLA‐4 +49A/G 5′ CAAGCCAGATTGGAGTTTA 3′ T1 = 64
5′ CTCAGCTGAACCTGGCTA/G 3′ T2 = 58
CTLA‐4 +6230G/A 5′ AGGAAGGCAGATCAAAATGC 3′ T1 = 65
5′ CACCACTATTTGGGATATAACA/G 3′ T2 = 59
HGH 5′ GCCTTCCCAACCATTCCCTTA 3′
5′ TCACGGATTTCTGTTGTGTTTC 3′
Primers used for PCR‐RFLP
CTLA‐4 +49A/G 5′ CCACGGCTTCCTTTCTCGTA 3′ 56
5′ AGTCTCACTCACCTTTGCAG 3′
CTLA‐4 +6230G/A 5′ CATCCTTGCATTTGAATATTGTG 3′ 59
5′ AAGAATCACAGAGGGCCCAGTG 3′

CTLA‐4, cytotoxic T lymphocyte antigen 4; SNP, single nucleotide polymorphism; HGH, human growth hormone; RFLP, restriction fragment length polymorphism.