Table 1.
Putative MDV-1 gene products and homologs present in other herpesviruses*
| ORFs | Location*, bp | Size, aa | Identity/overlap of aa, %
|
Designation | ORFs | Location*, bp | Size, aa | Identity/overlap of aa, %
|
Designation | ||
|---|---|---|---|---|---|---|---|---|---|---|---|
| MDV-2 | HSV-1 | MDV-2 | HSV-1 | ||||||||
| R-LORF1 | 333–1052 (c) | 239 | ICP0 | UL16 | 37996–39078 (c) | 360 | 216/352 (61) | 109/338 (32) | |||
| 137624–138343 | UL17 | 39082–41313 (c) | 743 | 402/727 (55) | 216/754 (28) | ||||||
| R-LORF2 | Join: (c) | 142 | vIL-8 | UL18 | 42745–43704 (c) | 319 | 251/320 (78) | 129/313 (41) | Capsid protein | ||
| 1437–1665 | UL19 | 43830–48005 (c) | 1391 | 1184/1393 (84) | 708/1368 (51) | MCP | |||||
| 1764–1899 | UL20 | 48307–49011 (c) | 234 | 128/228 (56) | 53/194 (27) | Membrane protein | |||||
| 2075–2138 | UL21 | 49272–50912 | 546 | 314/546 (57) | 157/544 (28) | ||||||
| 136538–136601 | UL22 | 51058–53499 (c) | 813 | 464/809 (57) | 157/689 (22) | gH | |||||
| 136777–136912 | UL23 | 53682–54740 (c) | 352 | 257/350 (73) | 99/322 (30) | TK | |||||
| 137011–137239 | UL24 | 54695–55669 | 323 | 152/310 (49) | 76/189 (40) | ||||||
| R-LORF3 | 1722–2030 | 102 | UL25 | 55701–57452 | 583 | 430/581 (74) | 258/570 (45) | ||||
| 136646–136954 (c) | UL26 | 57493–59409 | 636 | 322/533 (60) | 191/538 (35) | ||||||
| R-LORF4 | 2334–2711 (c) | 125 | LORF5 | 59557–59916 | 136 | ||||||
| 135965–136342 | UL27 | 59616–62213 (c) | 865 | 715/865 (82) | 411/847 (49) | gB | |||||
| R-LORF5 | 2686–3033 | 115 | UL28 | 62288–64669 (c) | 793 | 561/785 (71) | 350/773 (45) | ||||
| 135643–135990 (c) | UL29 | 64861–68436 (c) | 1191 | 949/1189 (79) | 504/1119 (45) | DNA binding pro. | |||||
| R-LORF6 | 4200–4817 (c) | 205 | UL30 | 68705–72361 | 1218 | 880/1180 (74) | 612/1155 (52) | DNA polymerase | |||
| 133859–134476 | UL31 | 72285–73187 (c) | 300 | 230/300 (75) | 126/255 (49) | ||||||
| R-LORF7 | 4270–5289 (c) | 339 | Meq | UL32 | 73204–75129 (c) | 641 | 440/641 (68) | 281/671 (41) | glycoprotein | ||
| 133387–134406 | UL33 | 75128–75490 | 120 | 67/115 (58) | 40/110 (36) | ||||||
| R-LORF8 | 5615–6028 | 137 | UL34 | 75623–76453 | 276 | 173/271 (63) | 93/188 (49) | Virion protein | |||
| 132648–133061 (c) | UL35 | 76537–76929 | 130 | 88/127 (69) | |||||||
| R-LORF9 | 8281–8604 (c) | 107 | UL36 | 76990–86967 | 3325 | 1552/2703 (57) | 840/3050 (27) | LTP | |||
| 130072–130395 | LORF6 | 86615–87082 | 155 | ||||||||
| R-LORF10 | 9009–9311 | 100 | UL37 | 87182–90322 (c) | 1046 | 624/1025 (62) | 282/1029 (27) | Capsid assem. pro. | |||
| 129365–129667 (c) | LORF7 | 90033–90395 | 120 | ||||||||
| R-LORF11 | 10152–10463 | 103 | UL38 | 90695–92107 | 470 | 294/472 (62) | 138/169 (37) | ||||
| 128214–128525 (c) | UL39 | 92332–94800 | 822 | 603/792 (76) | 370/776 (47) | RR large unit | |||||
| R-LORF12 | 11601–11948 (c) | 115 | UL40 | 94853–95884 | 343 | 256/323 (79) | 187/304 (61) | RR small unit | |||
| 126727–127076 | UL41 | 95932–97257 (c) | 441 | 288/439 (65) | 110/285 (38) | vhs protein | |||||
| LORF1 | 11893–12894 (c) | 333 | UL42 | 97914–99023 | 369 | 272/365 (74) | 85/279 (30) | Subunit of DNA pol | |||
| R-LORF13 | 12280–12594 | 104 | UL43 | 99183–100445 | 420 | 228/422 (54) | |||||
| R-LORF14 | 12389–12856 | 155 | 38/91 (41) | pp24 | UL44 | 100665–102170 | 501 | 364/501 (72) | 60/242 (24) | gC | |
| LORF2 | Join: | 752 | 398/763 (52) | v-lipase | LORF8 | 102767–103493 (c) | 208 | ||||
| 13091–13186 | UL45 | 103033–103668 | 211 | 155/211 (73) | |||||||
| 13257–15431 | UL46 | 103801–105507 (c) | 568 | 231/559 (41) | 110/383 (28) | ||||||
| LORF3 | 16351–17547 | 198 | UL47 | 105649–108075 (c) | 808 | 409/844 (48) | 129/586 (22) | ||||
| UL1 | 17737–18224 | 195 | 102/169 (60) | 22/88 (25) | gL | UL48 | 108314–109597 (c) | 427 | 248/409 (60) | 131/335 (39) | VP16 |
| LORF4 | 17745–18173 (c) | 142 | UL49 | 109705–110454 (c) | 249 | 129/252 (51) | 43/135 (31) | VP22 | |||
| UL2 | 18206–19147 | 313 | 203/361 (63) | 131/268 (48) | UL49.5 | 110597–110890 (c) | 95 | 67/95 (70) | Membrane protein | ||
| UL3 | 19173–19858 | 228 | 153/215 (71) | 110/221 (49) | UL50 | 110867–112177 | 436 | 254/389 (65) | 60/162 (37) | ||
| UL4 | 20374–21180 (c) | 268 | 144/268 (53) | 40/128 (28) | UL51 | 112265–113014 (c) | 249 | 126/181 (69) | 69/151 (45) | ||
| UL5 | 21234–23810 (c) | 858 | 667/849 (78) | 476/849 (56) | Helicase | UL52 | 113016–116243 | 1075 | 698/1073 (65) | 405/1071 (37) | |
| UL6 | 23882–26038 | 718 | 481/680 (70) | 269/609 (44) | Virion protein | UL53 | 116222–117286 | 354 | 227/351 (64) | 90/343 (26) | gK |
| UL7 | 25875–26792 | 305 | 171/303 (56) | 80/264 (30) | UL54 | 117434–118855 | 473 | 260/485 (53) | 82/230 (35) | ICP27 | |
| UL8 | 26826–29132 (c) | 768 | 480/766 (82) | 192/774 (24) | LORF9 | 118985–119794 (c) | 269 | 118/192 (61) | |||
| UL9 | 29146–31671 (c) | 841 | 604/877 (68) | 403/846 (47) | OBP | UL55 | 119962–120459 | 166 | 92/162 (56) | 39/120 (32) | |
| UL10 | 31770–33044 | 424 | 325/424 (76) | 104/402 (29) | gM | LORF10 | 120818–121399 (c) | 193 | |||
| UL11 | 33098–33352 (c) | 84 | 27/51 (52) | 12/28 (42) | LORF11 | 122031–124742 (c) | 903 | 480/900 (53) | |||
| UL12 | 33328–34902 (c) | 524 | 265/468 (56) | 142/392 (36) | LORF12 | 124944–125390 (c) | 148 | ||||
| UL13 | 34893–36434 (c) | 513 | 336/512 (65) | 142/417 (34) | PK | R- | 125416–126288 (c) | 290 | 64/158 (40) | pp38 | |
| UL14 | 36152–36898 (c) | 248 | 123/229 (53) | 42/139 (30) | LORF14a | ||||||
| UL15 | Join: 36913–37956 | 737 | 570/737 (77) | 405/743 (54) | R- | 126023–126397 (c) | 124 | ||||
| 41457–42629 | LORF13a | ||||||||||
*
A homologous search was conducted with advanced blast from the National Center of Biotechnological Information with nonfilter option. The result was expressed as number of identical amino acids/number of overlapped amino acids of MDV-1 gene product with other herpes virus homolog (percentage of identity).