Table 3 Association of cathepsin B gene polymorphisms in tropical calcific pancreatitis patients and controls.
SNP† | Cohort I | Cohort II | Total | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Allele frequency‡ | χ2 | OR | 95% CI | p Value | Allele frequency‡ | χ2 | OR | 95% CI | p Value | Allele frequency‡ | χ2 | OR | 95% CI | p Value | ||||
Patients (n = 140) | Controls (n = 155) | Patients (n = 166) | Controls (n = 175) | Patients (n = 306) | Controls (n = 330) | |||||||||||||
Leu26Val* | 0.48 | 0.30 | 6.81 | 2.15 | 1.60–2.90 | 0.009 | 0.45 | 0.28 | 6.23 | 2.10 | 1.56–2.84 | 0.013 | 0.46 | 0.29 | 6.17 | 2.09 | 1.55–2.81 | 0.013 |
C595T | 0.12 | 0.20 | 2.38 | 0.55 | 0.37–0.81 | 0.123 | 0.10 | 0.21 | 4.62 | 0.41 | 0.28–0.63 | 0.032 | 0.11 | 0.21 | 3.72 | 0.46 | 0.31–0.70 | 0.054 |
T663C | 0.52 | 0.58 | 0.73 | 0.78 | 0.59–1.04 | 0.394 | 0.53 | 0.60 | 1.00 | 0.75 | 0.56–1.00 | 0.318 | 0.53 | 0.59 | 0.73 | 0.78 | 0.59–1.04 | 0.393 |
Ser53Gly | 0.10 | 0.04 | 2.76 | 2.67 | 1.45–4.91 | 0.096 | 0.09 | 0.04 | 2.06 | 2.37 | 1.28–4.40 | 0.152 | 0.09 | 0.04 | 2.06 | 2.37 | 1.28–4.40 | 0.152 |
n, number of individuals, χ2, chi square value; OR, odds ratio; 95% CI, 95% confidence interval; SNP, single nucleotide polymorphism.
†Nomenclature is represented as wild status‐position‐mutant status.
‡, mutant allele frequency.
The frequency of mutant alleles for each SNP was compared between patients and controls and Pearson's χ2 and p values were calculated together with OR and 95% CI.
*Statistically significant after allowing for multiple post hoc testing (pcorr = 0.025, with Bonferroni correction).