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. 2007 Jan 5;92(6):2120–2130. doi: 10.1529/biophysj.106.096016

TABLE 1.

Identified mutations for improving the binding of cis-verbenol in the presence of water molecules for the first three case studies

Computational design
Design position Wild-type residue Binding of cis-verbenol (case study 1) Binding of cis-verbenol but not α-pinene (case study 2) Binding of cis-verbenol but not verbenone (case study 3)
7 Asp WT* WT WT
15 Phe Gly, Gln, His Gly, His, Thr Gly, Gln, His
17 Ala Gln, Arg Asn, Arg Gln, Arg
20 Val Arg, Thr, His Trp, Gln Tyr, Arg, Thr
23 Leu Gln, Glu, Lys Trp, Gln, Lys Phe, Gln, Glu, Lys
24 Thr Val, Asn, Gln WT His, Gln, Glu
32 Leu Tyr, Asn, Arg Gln, His, Phe Ala, Ser, Tyr, Asn, Arg
34 Phe Met, Glu, His Tyr, Gln, Arg, His Arg, Glu, Gln, His
35 Phe WT WT WT
36 Ile Thr, Asn Asn Asn, Asp
37 Asp Val, Lys, Arg Lys, Arg Val, Lys, Arg
38 Arg Ala, His, Trp Ala, His His, Ala, Trp
48 Asn WT WT WT
80 His WT WT WT
82 Tyr Ala, Phe WT Gly, Ala, Phe
91 Trp Gly, Ala, His Phe, Arg, His Ala, Gly, His
*

WT refers to wild-type AraC.