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. 2006 Dec 22;92(6):2000–2006. doi: 10.1529/biophysj.106.095059

TABLE 1.

NN standard free energies ΔG37 (in kcal/mol)

Dimer set Unified Self-consistent
TA −0.58 −0.57 ± 0.04
AT −0.88 −0.91 ± 0.04
AA-TT −1.00 −0.97 ± 0.02
AG-CT −1.28 −1.20 ± 0.04
GA-TC −1.30 −1.35 ± 0.03
AC-GT −1.44 −1.28 ± 0.03
CA-TG −1.45 −1.48 ± 0.03
GG-CC −1.84 −1.82 ± 0.04
CG −2.17 −2.14 ± 0.04
GC −2.24 −2.19 ± 0.06
A-T ending 1.03 0.92 ± 0.08
C-G ending 0.98 0.85 ± 0.07
Symmetry 0.43 0.43

The unified set proposed by SantaLucia (10) is compared to the self-consistent set. Both sets have been obtained by model fits to the same 108-sequence data set (11).