Table 2.
| Category | Amount |
|---|---|
| DNA contigs | 1 |
| DNA sequenced | 3,179,300 bp |
| Coding sequence | 2,812,658 bp |
| G + C content | 51.46% |
| Transfer RNAs | 48 |
| Ribosomal RNA operons | 1 |
| Pseudogenes | 0 |
| ORFs‡, total | 3,169 (100%) |
| ORFs with assigned function | 1,618 (51%) |
| ORFs without assigned function | 1,551 (49%) |
| ORFs without function, no database match | 421 (13.3%) |
| ORFs in chromosomal clusters | 1,493 (47.1) |
| ORFs in paralog clusters | 786 (24.8%) |
| ORFs with Pfam matches | 1,852 (58.4%) |
| ORFs with COG matches | 1,986 (62.8%) |
*According to ERGO database (www.integratedgenomics.com).
†The protein similarity cutoff score used was 1.0e−05.
‡ORFs, open-reading frames, coding regions