Table 1.
Protein name | Accession No. | Total Ion Score C.I. % | Averaged ICAT ratio*(H/L) |
---|---|---|---|
Up-regulated | |||
Gag | IPI00118848 | 100 | 1.832 |
Gag protein | IPI00466581 | 99.999 | 1.814 |
T-complex protein 1 subunit epsilon | IPI00116279 | 99.378 | 1.826 |
Similar to Hsp60, mitochondrial precursor | IPI00461249 | 56.155 | 1.663 |
Heterogeneous nuclear ribonucleoprotein U | IPI00458583 | 99.895 | 1.547 |
Similar to aspartate aminotransferase, mitochondrial precursor | IPI00475310 | 100 | 1.542 |
Aspartate aminotransferase, mitochondrial precursor | IPI00117312 | 100 | 1.512 |
Down-regulated | |||
Beta-centractin | IPI00153990 | 73.581 | 0.681 |
Tubulin beta-3 | IPI00112251 | 99.993 | 0.67 |
Tubulin beta-2c chain | IPI00169463 | 99.451 | 0.67 |
Tubulin alpha-2 chain | IPI00551116 | 99.740 | 0.517 |
Tubulin alpha-4 chain | IPI00117350 | 99.369 | 0.516 |
Elongation factor 1-alpha 1 | IPI00307837 | 98.991 | 0.561 |
Elongation factor 2 | IPI00466069 | 100 | 0.486 |
Microtubule-associated protein 1B | IPI00130920 | 92.545 | 0.272 |
Hsp105 | IPI00224109 | 80.993 | 0.559 |
Hsp70 | IPI00331556 | 78.526 | 0.559 |
GTP-binding nuclear protein Ran | IPI00134621 | 80.728 | 0.646 |
Peptidyl-prolyl cis-trans isomerase | IPI00458341 | 100 | 0.619 |
T-complex protein 1 subunit gamma | IPI00116283 | 90.604 | 0.591 |
Tyrosine 3-monooxygenase/ tryptophan 5- monooxygenase activation protein, zeta polypeptide | IPI00473203 | 99.88 | 0.562 |
Ubiquitin carboxyl-terminal hydrolase isozyme L1 | IPI00313962 | 100 | 0.515 |
Isoform 1 of cellular nucleic acid binding protein | IPI00330767 | 96.078 | 0.478 |
Fructose-bisphosphate aldolase A | IPI00221402 | 88.547 | 0 |
Isoform 2 of zinc finger X-chromosomal protein | IPI00134496 | 31.306 | 0 |
*H/L represents the abundance ratio between heavy isotope (13C) labeled proteins (Neuro-2a-Ng) and light isotope (12C) labeled proteins (Neuro-2a control). The averaged ICAT ratios equal to or higher than 1.5 (up-regulated expression) or, alternatively, equal to or lower than 0.7 (down-regulated expression) represent a significant change in protein expression in Neuro-2a-Ng cells relative to control cells.